Gene Shewmr7_3060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3060 
Symbol 
ID4257310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3628524 
End bp3629141 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content49% 
IMG OID638123738 
Producthypothetical protein 
Protein accessionYP_739101 
Protein GI114048551 
COG category[S] Function unknown 
COG ID[COG4764] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.272775 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.469767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGGC TTTCGACAAC TCTGTTATGT GCATCCATAG GTTTTCTCTC TGGCTGCGCC 
ACTTCTCCGC CTAAATCTCC CGATAACCTT TGCGATATTT TCCAAGAGCA TCGTTCATGG
TACGAAGCCG CTAAGGACAC CCGTGATAAA TGGGGCGTGC CTGTGCATGT GCCGCTGGCG
ATGATGTATC AAGAAAGCTC CTTCAAGCAT AATGCCGCGC CGCCAATGGA ATATTTTTTA
GGGTTTATTC CCATCGGGCG AGCCAGTGAT GCCTATGGCT ACGCACAGGC AAAAACCATG
ACCTGGGATG ATTATGTTCG CGAGACGGGA AACAGCTGGT CTTCGCGGAG TAATTTTGAT
GATGCCATGG ATTTTATGGG TTGGTTTATT TACAAGACCA ATAAAATTAA TGGGGTGTCC
AAGTGGGATG CGAGGGCGCA ATACCTCAAC TACCACGAAG GGTGGGGTGG CTATCGCCGT
GGGACTTATA AATCTAAGGC GTGGCTGGTC AAAGTCGCGG CTAAGGTGGA TGACAGGGCT
AAGCGTTATG CGGCCCAGTA TAAAACCTGT CAGGAGGATT TAGATTCTTC TTGGCTATGG
CGCTTATTTT TCGGTTAG
 
Protein sequence
MKWLSTTLLC ASIGFLSGCA TSPPKSPDNL CDIFQEHRSW YEAAKDTRDK WGVPVHVPLA 
MMYQESSFKH NAAPPMEYFL GFIPIGRASD AYGYAQAKTM TWDDYVRETG NSWSSRSNFD
DAMDFMGWFI YKTNKINGVS KWDARAQYLN YHEGWGGYRR GTYKSKAWLV KVAAKVDDRA
KRYAAQYKTC QEDLDSSWLW RLFFG