| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3054 |
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| Symbol | |
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| ID | 4257304 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3620681 |
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| End bp | 3621283 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638123732 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_739095 |
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| Protein GI | 114048545 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.217584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.28403 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCTTGG CGATACCGCA AATGCATGCC CATGAGCATA CCGATGAACA GTTAATGCAA
CGCTATGCCA AGGGCGATGG CAAAGCGTTT GAGCAGCTTT ATCTTAAACA CAAAGGCGCC
TTGTACCGTT ACTTTGTGCG CCAACTCGGA GACAAACAGT TAGCCGAAGA TTTATATCAG
GAAACCTGGG GGCGGGTGAT CCGTGCCGCC ACCAATTATG AGCCGAGCGC CAAATTTAAT
ACTTGGCTCT ATCGAATAGC TCATAATCTG TTGATTGACC ACGTCAGAGC CGTCAAGCCC
GTCGACTTAG TCAGTCATGA TAATGAGGAA GGGCTTGATA CCTTTGTAGG GGCGGAGCAG
GAACAACCCG ATGTGCATTG GCAGGAAACG CAAAAAAGCT TGTTGCTGAA AACTTGTATT
GCCCTGTTAC CCCAAGTGCA AAAAGAGGCC TTTATTCTCA ATATCGAAAT GGGCTTTACC
GCTGCTGTGA TAAGCGATAT CGCAGGGGTA ACACTCGAAG CGACCAAGAG CCGCATTCGC
TATGCATATC AAAGCTTAAA AGATTGTGTC AATGCTAAAT GGCAGGAGGT TGGTCATGAG
TAA
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| Protein sequence | MALAIPQMHA HEHTDEQLMQ RYAKGDGKAF EQLYLKHKGA LYRYFVRQLG DKQLAEDLYQ
ETWGRVIRAA TNYEPSAKFN TWLYRIAHNL LIDHVRAVKP VDLVSHDNEE GLDTFVGAEQ
EQPDVHWQET QKSLLLKTCI ALLPQVQKEA FILNIEMGFT AAVISDIAGV TLEATKSRIR
YAYQSLKDCV NAKWQEVGHE
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