| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_3039 |
|---|
| Symbol | ileS |
|---|
| ID | 4256419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 3601465 |
|---|
| End bp | 3604287 |
|---|
| Gene Length | 2823 bp |
|---|
| Protein Length | 940 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638123717 |
|---|
| Product | isoleucyl-tRNA synthetase |
|---|
| Protein accession | YP_739080 |
|---|
| Protein GI | 114048530 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0060] Isoleucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00392] isoleucyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0469358 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.419814 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACT ATAAATTTAC TTTGAATTTG CCGGAAACTG AGTTTCCGAT GCGTGGTAAT
TTGGCAAATC GCGAGCCAGA GATGTTAGAG CGCTGGACGA AAGACGGTCT GTATCAGCAG
ATCCGTGATA GCCGAATTGG CCGCACACCT TTTATTTTGC ATGACGGCCC ACCGTATGCG
AACGGCAGCA TTCATATTGG TCACTCAGTC AACAAAATTC TTAAGGACAT TATTGTTAAG
TCAAAAACCA TGTCAGGTTT TGACGCGCCT TATGTGCCTG GTTGGGATTG CCACGGTCTG
CCAATTGAAC TGAAAGTTGA GCAAAAAGTC GGTAAGCCTG GTCAAAAAAT TTCAGCGGCC
GAATTCCGTG AGGAATGCCG TAAATATGCT GCCGAGCAAG TCGATGGCCA ACGTGCTGAC
TTTATTCGTT TAGGCGTGCT GGGTGATTGG CAAAAGCCTT ATTTAACGAT GGACTTTGCT
ACCGAAGCCA ATATCGTACG CTCTTTATCT AAAGTGATTG AAAACGGTCA CTTACATAAA
GGTGTTAAAC CTGTTCATTG GTGTACAGAC TGTGGTTCAG CATTGGCAGA AGCCGAAGTG
GAATACGAGG ATAAAACCTC TCCCGCTATC GATGTGGCCT TTACTGCGAC TGATAGCAAA
GCTTTAGCCG CTCAATTTGG TGTAAGCGAT TACTCACATC CTGTGGCTAT GGTGATTTGG
ACTACCACCC CTTGGACGCT GCCTGCTAAC CGTGCGTTAT CTATCAGCCC AGAGCTTGAT
TACAGCTTGG TTGAATTTGT GAAAGATGGC GCGACTCACG CGGTTATTCT GGCCGACGTG
TTAGTTGAAG CTTGTATGAC GCGTTACGGC GCCGAGAGTC ACAACGTGTT AGGTAAAGTT
AAAGGCGCAG CACTTGAGCT GGTTCGCTTT AAGCATCCAT TCTTAGCCTT TGACGTTCCT
GCGATTTTAG GTGACCACGT GACGACTGAC GCCGGTACGG GTGTGGTTCA CACAGCACCT
GGCCATGGTC AAGACGACTT TGTGGTAGGT CAAAAATACG GTTTAGAAGT GGCAAATCCA
GTTGGCGATA ACGGTGTTTA CAAACCAGAC ACTGAGTTTT TTGCTGGCCA ACACGTATTT
AAAGCAAACG ATAATGTGGT TGCACTGCTG AAAGAAAAAG GCGCGCTATT ACACCATGTT
GCGTACCGTC ACAGCTATCC ACACTGCTGG CGCCATAAAA CGCCCATTAT CTTCCGTGCA
ACGCCGCAAT GGTTTATCTC AATGGATAAC CAAAATCTGC GCAAGCAAGC ATTAAGCGAA
ATTGAGCAGA CTCAGTGGAT CCCTGACTGG GGCCAAAGCC GTATCGAAAA GATGGTTGAG
AATCGCCCTG ATTGGTGTAT CTCCCGTCAA CGTACTTGGG GCGTGCCAAT TACCTTATTC
GTACACCGCG AAACTGAAGA GCTGCACCCT GACAGCGTGT CGTTAATGGC ACGTGTGGCC
AACCGCATTG AGCAAGAAGG CATTCAAGCT TGGTGGGATC TCGATGCCGC CGAATTACTG
GGCGAAGAAG CCGAACAATA CCGCAAAGTG ACCGATACCT TAGACGTATG GTACGACTCA
GGCTCAACCT TTGCTTCTGT GGTAGGCGCA CGCCCAGAGT TTCATGGTCA TGGTGTCGAT
TTATACCTTG AAGGTAGCGA TCAACACCGT GGTTGGTTTA TGTCATCTCT GATGATTTCT
ACCGCTATGA CTGGCAAAGC ACCTTACAAG CAAGTGCTGA CCCACGGCTT TACCGTTGAT
GGTAAAGGTC GCAAGATGTC TAAATCTATC GGTAACGTTA TTGCGCCGCA GCAAGTCACT
AACAAGCTAG GTGCGGATAT TCTGCGTCTT TGGGTTGCGG CAACCGACTA CAGCGGTGAA
ATGACGGTAT CGGATGAAAT CTTAAACCGT AGCGCCGATG CTTATCGCCG TATTCGTAAC
ACCGCTCGTT TCTTACTGGC GAACCTTAAT GGCTTCGACC CTGCTAAGGA CTTAGTAGCA
GTAGAAGATA TGGTGGCGTT AGATCGCTGG GCGGTGCGCC GCGCTGCAGC GCTGCAGCAA
GAAATCATTG AAGCTTATGA GCAATATAAC TTCCATATTG TGACGCAAAA GCTGATGCAG
TTCTGCTCGG TTGAGCTAGG TAGCTTCTAC TTAGACATCA TCAAAGACCG TCAATATACC
GCTAAGCAAG AGGGCCATGC CCGCCGTAGC TGCCAATCGG CACTGTTCCA CATTGCTGAG
GCTATGGTGC GTTGGATTGC ACCAATCCTG AGCTTTACTG CCGACGAAGT GTGGCAATTA
CTGCCAGGTC AACGCGATGC TTACGTGTTT ACCCAAGAAT GGTACCAAGA TCTGCAATCT
ATCACTTTAG ATACTGATTT AAGTGATGCG TACTGGGACA ATCTGCTGAC AGTGCGTAAC
GAAGTCAACA AGGTTATCGA GCAAGCGCGC CGCGATAAAC GTATTGGCGG CTCCTTAGAA
GCCGAAGTCA CGCTGTTTGC CGATGCTGCT TTAACTGAGC AGTTAACGCA CATTGGCGAT
GAGCTGCGTT TTGTCCTGTT AACTTCAGAA GCCAAAGTAT TGCCATTGGC AGATGCGACA
AGCGATGCCG TTGAAACTGA ATTGGCGTCA TTGAAGTTAG TGGTAAATGC AACAACAGCA
GAGAAATGCG AACGTTGTTG GCACCACAGG GAAGAAGTGG GCACGATTGA GGCTCACCCA
ACGCTGTGCC ATCGCTGCGT AACCAATATT GAAGGTGACG GCGAAGTTCG TCTGTTTGCG
TAA
|
|---|
| Protein sequence | MSDYKFTLNL PETEFPMRGN LANREPEMLE RWTKDGLYQQ IRDSRIGRTP FILHDGPPYA
NGSIHIGHSV NKILKDIIVK SKTMSGFDAP YVPGWDCHGL PIELKVEQKV GKPGQKISAA
EFREECRKYA AEQVDGQRAD FIRLGVLGDW QKPYLTMDFA TEANIVRSLS KVIENGHLHK
GVKPVHWCTD CGSALAEAEV EYEDKTSPAI DVAFTATDSK ALAAQFGVSD YSHPVAMVIW
TTTPWTLPAN RALSISPELD YSLVEFVKDG ATHAVILADV LVEACMTRYG AESHNVLGKV
KGAALELVRF KHPFLAFDVP AILGDHVTTD AGTGVVHTAP GHGQDDFVVG QKYGLEVANP
VGDNGVYKPD TEFFAGQHVF KANDNVVALL KEKGALLHHV AYRHSYPHCW RHKTPIIFRA
TPQWFISMDN QNLRKQALSE IEQTQWIPDW GQSRIEKMVE NRPDWCISRQ RTWGVPITLF
VHRETEELHP DSVSLMARVA NRIEQEGIQA WWDLDAAELL GEEAEQYRKV TDTLDVWYDS
GSTFASVVGA RPEFHGHGVD LYLEGSDQHR GWFMSSLMIS TAMTGKAPYK QVLTHGFTVD
GKGRKMSKSI GNVIAPQQVT NKLGADILRL WVAATDYSGE MTVSDEILNR SADAYRRIRN
TARFLLANLN GFDPAKDLVA VEDMVALDRW AVRRAAALQQ EIIEAYEQYN FHIVTQKLMQ
FCSVELGSFY LDIIKDRQYT AKQEGHARRS CQSALFHIAE AMVRWIAPIL SFTADEVWQL
LPGQRDAYVF TQEWYQDLQS ITLDTDLSDA YWDNLLTVRN EVNKVIEQAR RDKRIGGSLE
AEVTLFADAA LTEQLTHIGD ELRFVLLTSE AKVLPLADAT SDAVETELAS LKLVVNATTA
EKCERCWHHR EEVGTIEAHP TLCHRCVTNI EGDGEVRLFA
|
|---|
| |