Gene Shewmr7_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_3005 
Symbol 
ID4256102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3562139 
End bp3562651 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content49% 
IMG OID638123683 
Producthypothetical protein 
Protein accessionYP_739046 
Protein GI114048496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.195237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACTC GATTTTTCGA TAAACTGATC TTCGGTTTTA TCTTAGTGAT GGCGCTGCAA 
CTTCCTCAAT TAGCCGATCA TTATCAGCAA TTTTTGGCGG GGCTTTATAC GTCGACTCAA
TGGCAAGTTG AGGGCTATGA GGCCACGGCG AAGGAATATC ACTACGGCGA TGTAGAAACC
ATGATTGCCC GCCATTTGCA AAACGAGGAG CCTAGCGTTA GGGCGGATGC CGAGCAAAAG
CGCCAGACGC TAGCCCTGTA TCAAGCGCTG CAGCAGGGAA TGCAGACCTT TGCGCAGGGG
AATCTCTTTG AGAAAACCGC CTATATGTTT AATCCAGCTC GTTTTGAATA TTTACGGCAA
ACCATAGTTA ACTTTAAGCC TGGCATCCCG TTAACCACCA GTGGGATAGG CTTTGGCGTG
CTGATGGCGT TAGTCGTGCA TTATCTTGGC TCGCTGCCCT TTATTCTGTG GGCAAGACGC
CGTAAACGCC TTAACGCTGT CCGCGCCATT TAG
 
Protein sequence
MITRFFDKLI FGFILVMALQ LPQLADHYQQ FLAGLYTSTQ WQVEGYEATA KEYHYGDVET 
MIARHLQNEE PSVRADAEQK RQTLALYQAL QQGMQTFAQG NLFEKTAYMF NPARFEYLRQ
TIVNFKPGIP LTTSGIGFGV LMALVVHYLG SLPFILWARR RKRLNAVRAI