| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2981 |
|---|
| Symbol | |
|---|
| ID | 4256292 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 3532852 |
|---|
| End bp | 3533691 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638123658 |
|---|
| Product | rRNA (guanine-N(1)-)-methyltransferase |
|---|
| Protein accession | YP_739022 |
|---|
| Protein GI | 114048472 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000243248 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0301328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTC AATTTCAATG CCCTACCTGC GGTTTGGCAC TGATGCAACA TCAGGCATCC
CAAGGTTTTT ATTGTGCAAA TAAGCATCAT TTTGATAAAA ACGAGGCGGG ATATTGGATT
TTTACTAAAC CCGCGCGCCA AAAGCCTACG GGAGATTCCC GCCAACAAGT AAGGGCGAAG
CGATTCCTGC TTGAGTCAGG GATTTTTGCA CCTTTGATCG AAAAAATGGG CGCGATGATT
GCTACTCATC TCAAGGCAGA TGATTGCCTG TTGGATTACG AGTGCGCTGA GGGCTTCTAC
TTGCGCGCTT TAGCTTCGGT GCTACCTAGG CTTACAAATG GATTAAACGT CCAGTACAGT
GGCGTAGCGG ACGCAGAAAA TACTATTTTT GCAGCAGCCA AAGCGCAAAC CCCTGCAATA
CTCTGCTTAA GCACCTCAAA AGTGCTGCCT TTTGCCGACA ATTGCATTGA CCTTATCACA
GTGGTCGATA AGCCGTTGAA GGGGAAGGAA TGCGTTCGAG TGCTCAAGGA GCAGGGATTC
ATCTTACAGG TGATCCCCGG CGCTCGTCAT TTGTGGCAAA TAAGGGAGTG TATTTATCCG
GAACTGACTG AAAAAACTGT TCAAATAAAT TTACCTTCAG CACTAATAGT CAAAGACCAA
CAGCGATTGC AATTCAGCTT GTCTGTAACG GGCGAACAAG CTTTGGTTTT ACTCGATATG
ACACCTTATG CGTGGCGTGC CTCTGAGCAG GTCAAACAGC TAATTCGGAC GCGAACGTTC
GTTGCTCTCG AAATTGACTT TGTTTTAGTC TTGGCGCAAA AGTCTTTAAT TGGGTCTTAA
|
|---|
| Protein sequence | MSLQFQCPTC GLALMQHQAS QGFYCANKHH FDKNEAGYWI FTKPARQKPT GDSRQQVRAK
RFLLESGIFA PLIEKMGAMI ATHLKADDCL LDYECAEGFY LRALASVLPR LTNGLNVQYS
GVADAENTIF AAAKAQTPAI LCLSTSKVLP FADNCIDLIT VVDKPLKGKE CVRVLKEQGF
ILQVIPGARH LWQIRECIYP ELTEKTVQIN LPSALIVKDQ QRLQFSLSVT GEQALVLLDM
TPYAWRASEQ VKQLIRTRTF VALEIDFVLV LAQKSLIGS
|
|---|
| |