Gene Shewmr7_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2960 
Symbol 
ID4257402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3503884 
End bp3504375 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content46% 
IMG OID638123637 
Producthypothetical protein 
Protein accessionYP_739001 
Protein GI114048451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.373099 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00896796 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCGAATAT TGTGTCTTTT AGTCTGTCTT ATTTTTGTTC CGGCCTTGTA TCCTACGTCT 
GCACACGCCA ACTCAGGGGA AATGCCAGCA GAACAGCAGT TAGCCGTAAA ATACATGAAT
GCGCTAACCG AGCACGACTA TCAAACACTC GGCAAATTCT ATAACCGTGA TACCGTCTTC
TTCGATAAAA CCGCCAATCG TAAATACACG GGTGGGCGGT TTATTATCGA CTTCTTTGAG
CGCGCCCACG AAGGTGTGCT CGAATATGAT TTCAATATCG AGCATATGTA TAACGCAGGC
TCCCTCGTGG TGATGATTGG TAACTATCAC TTTAAAGGGC CCGGCGAGCA GTTTGGTAAA
CCCGGAAAAA TTATTGATGT CGCCATTCCA GGGGTCACTA GCCTTAAGCT TGATATGCGT
AATCACAGGG TCACTGAGCA TGTGGATCTG ATCGATTACC AGACCATGTC AGACCAATTA
GCGATGCAGT AG
 
Protein sequence
MRILCLLVCL IFVPALYPTS AHANSGEMPA EQQLAVKYMN ALTEHDYQTL GKFYNRDTVF 
FDKTANRKYT GGRFIIDFFE RAHEGVLEYD FNIEHMYNAG SLVVMIGNYH FKGPGEQFGK
PGKIIDVAIP GVTSLKLDMR NHRVTEHVDL IDYQTMSDQL AMQ