| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2874 |
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| Symbol | |
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| ID | 4255708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3411469 |
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| End bp | 3412740 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638123551 |
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| Product | HAAAP family transport protein |
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| Protein accession | YP_738915 |
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| Protein GI | 114048365 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.547071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGCAA CCATAACGGC AGCACAATGG AAAGAGGATA CCCGCTTCGA CAGTACGGAT
TGGGGCTGGA TCATTATGAG TATTGGCATG GCGATTGGCG CCGGGATCGT ATTTTTGCCA
GTGCAGGTGG GGTTGATGGG CTTGTGGGTA TTCTTGCTTT CAAGCGTGAT TGGTTATCCT
GCCATGTATT TGTTTCAACG CTTGTTTATT AATACCTTGG CCGAGTCACC CGAGTGTAAG
GATTATCCGA GTGTGATTTC GGGATATCTG GGCAAAAACT GGGGCATCTT ACTCGGCGGC
TTATATTTCA TTATGTTGGT GATTTGGGTG TTTGTGTATT CCACGGCTAT CACCAATGAT
AGTGCCTCCT TTTTACAAAG CTTTGGCGCG ACCACATCAT TGTTGTCTGA AAATCCCTTC
TATGGCCTAG CGCTAATTTG CGGTTTAGTC GCATTGGCCT CTCGGGGAGA AAACCTGTTA
TTTAAGATCT CCACCTTTAT GGTGCTCACA AAGCTTGGTG TGGTGGCGGT GCTGGGGCTA
ATGATGGTCG ATAAGTGGGA TATCAATAAT ATCGGTAGCG TGCCCAGCAC GGGCGATTGG
CTAAAGGATG CGATTGTGAT GTTGCCTTTT ACGCTCACAT CTATTCTATT TATCCAAAGT
TTAAGCCCTA TGGTGATCTC TTACCGCTCG CGGGAAAAAT CCCTTGCCGT TGCCCGCTTT
AAGGCGATGC GGGCGATGAA CGTTGCCTTT GGGGTGTTGT TTGTGGTGGT GTTTTTCTAC
GCTGTGTCTT TTACCCTCGC CATGGGGCAT GAGCAGGCGG TACGCGCCTC CCATGAAAAT
ATCTCCGCTT TAGCCATGGT GGCCCAGGGT ATGCCAGGAC AAACCTTAAA ACTGCTTAGC
CTGACCTTAA ATATCTTTGC GGTAATGACG GCGTATTTTG GTGTGTATTT AGGGTTTAGA
GAGGCGTGTC AGGGATTGAT CATGAATATG CTGCGCCGGG TGATGCCAGA GGAGCGGATC
AATAAGTCGA TAGTGGGTTA CGGCATCATG ATCTTTACCA TTTTGCTGTC GTGGGGCGCG
ATTGTATTAA ATGCCCCTGT GCTGAGTTTT ACCTCTATCT GCAGTCCAAT CTTTGGTTTA
GTGGGATGTT TGATCCCAGC CTATTTGGTC TATCGAGTGC CTGCGTTGCA CAAATATAAA
GGGGTGGCGC TGTATATCAT TATCGTCACC GGCTTACTGT TATGCATCTC TCCTCTGCTT
GCCTTTAGTT AA
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| Protein sequence | MDATITAAQW KEDTRFDSTD WGWIIMSIGM AIGAGIVFLP VQVGLMGLWV FLLSSVIGYP
AMYLFQRLFI NTLAESPECK DYPSVISGYL GKNWGILLGG LYFIMLVIWV FVYSTAITND
SASFLQSFGA TTSLLSENPF YGLALICGLV ALASRGENLL FKISTFMVLT KLGVVAVLGL
MMVDKWDINN IGSVPSTGDW LKDAIVMLPF TLTSILFIQS LSPMVISYRS REKSLAVARF
KAMRAMNVAF GVLFVVVFFY AVSFTLAMGH EQAVRASHEN ISALAMVAQG MPGQTLKLLS
LTLNIFAVMT AYFGVYLGFR EACQGLIMNM LRRVMPEERI NKSIVGYGIM IFTILLSWGA
IVLNAPVLSF TSICSPIFGL VGCLIPAYLV YRVPALHKYK GVALYIIIVT GLLLCISPLL
AFS
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