| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2851 |
|---|
| Symbol | |
|---|
| ID | 4256001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 3386203 |
|---|
| End bp | 3386727 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638123528 |
|---|
| Product | SmpA/OmlA domain-containing protein |
|---|
| Protein accession | YP_738892 |
|---|
| Protein GI | 114048342 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2913] Small protein A (tmRNA-binding) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCA GATTTTCAGA AGTAGCGCAT ACAATGATCA ATAAAAAGCA AAGTCTTACC
CTGCTGAGCG CCATTGCGCT CTCAGTTTCG CTCAGTGCCT GTAGCGTGTT TGATTGGCTG
ATCTATAAGC CCGATATTCC GCAAGGCAAC TACATGGAGC CGCAACAGGT TGAAAAGTTG
CGTATCGACA TGACCAAAGA GCAGGCCGAA TACATTCTTG GTCGCCCAGT ATTGCGTGAC
AGCTTTGCCG ATGACACTTG GTATTATGTG TACCACTATA AGAGTGGCCG TGATGCGAGC
ATTACCCACA AAGAACTGAT CCTGCACTTT ACTGGTAACA AATTAAGCTT AGTGAAGGGC
GATTATGAAT TAAGCCCAGA GTTTAATACG CCGCTTGAGC AGAGTAAGTT ACCTATGACC
AACACCGCTG AGTCTGCCCC GCTCGTGCCA GCACAGCGTC CAGATGAAAA GCCGTTAGTG
AAAGAAAATC AAACCGAAGC GCAAGTTCAA AAACCAATCA AGTAA
|
|---|
| Protein sequence | MAARFSEVAH TMINKKQSLT LLSAIALSVS LSACSVFDWL IYKPDIPQGN YMEPQQVEKL
RIDMTKEQAE YILGRPVLRD SFADDTWYYV YHYKSGRDAS ITHKELILHF TGNKLSLVKG
DYELSPEFNT PLEQSKLPMT NTAESAPLVP AQRPDEKPLV KENQTEAQVQ KPIK
|
|---|
| |