Gene Shewmr7_2801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2801 
Symbol 
ID4258416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3317257 
End bp3318024 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content48% 
IMG OID638123479 
Productflagellar motor protein PomA 
Protein accessionYP_738843 
Protein GI114048293 
COG category[N] Cell motility 
COG ID[COG1291] Flagellar motor component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.349306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.257402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTTAG CTACAGTGAT AGGATTAGTC GGGGGGTTTG GTTTTATCCT TTGGGCTATG 
ATGACCAGCG GCGGCATTGC AATTTTTATC GACGTGCCCT CTATCTTCAT CGTATTTGGT
GGTTCTTTCT TCGTCGTCAT GATGAAATTC AATCTGAAAC AGTTTTTCGG TGCGGTAAAA
ATCGCCATAA AAGCCTTTAT GTTTAAGATT GATAAGCCTG AAGATCTTAT CGAGCAGTCC
GTGACTATGG CGGACGCCGC CCGTAAAGGC GGATTCCTAG CCCTCGAAGA AGCGCAAATT
TCCAACAGTT TTATGCAAAA AGCCGTCGAT ATGTTGGTTG ATGGTCACGA TGGCGAAGTG
GTGCGTGCCG CACTGGAAAA AGACATTGCC CTCACCGAAG AGCGCCACCG CAATGGGATT
GCCATTTTTA GGGCCTTTGG TGACGTTGGC CCAGCTATGG GGATGATTGG TACCCTTGTG
GGTCTGGTAG CCATGTTATC CAACATGTCA GATCCAAAAT CGATTGGTCC CTCGATGGCG
GTGGCCTTGT TAACCACATT GTATGGCGCC GTGGTGGCTA ACATGGTAGC GATTCCTATC
GCCGACAAAC TCACCCTTCG CATGGGTGAA GAAATGCTTA ACCGCAACCT GATTATGGAT
GCGGTATTAG CCATTCAAGA TGGCCAAAAC CCACGGGTAA TTGAAGGTTT CTTAAAGAAT
TATCTTGCTG AAAAACAGCG GAAAATCGAT ACAACGGACG GAGAGTAG
 
Protein sequence
MDLATVIGLV GGFGFILWAM MTSGGIAIFI DVPSIFIVFG GSFFVVMMKF NLKQFFGAVK 
IAIKAFMFKI DKPEDLIEQS VTMADAARKG GFLALEEAQI SNSFMQKAVD MLVDGHDGEV
VRAALEKDIA LTEERHRNGI AIFRAFGDVG PAMGMIGTLV GLVAMLSNMS DPKSIGPSMA
VALLTTLYGA VVANMVAIPI ADKLTLRMGE EMLNRNLIMD AVLAIQDGQN PRVIEGFLKN
YLAEKQRKID TTDGE