| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2788 |
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| Symbol | |
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| ID | 4258403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3302632 |
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| End bp | 3303873 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638123466 |
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| Product | outer membrane porin |
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| Protein accession | YP_738830 |
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| Protein GI | 114048280 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.149615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGA AAAAGTCTTA TTTATCCTTG GTAGTGTTGT CTGCATTAGC GGTACCCGCA
ATCGCCGACA CCAGTATCGA CAAGATGTTC AGTGAAGGCA CAGTAAAAGG TGAATTACGT
CTTTTAGATT TCACCAAAGA TTTCGATGAA GGCACGACCA CCCAGCACAC GACGTCACTC
GGCGGTCTGT TCTATTACAA GACTGCAAAA GTGAATGGCC TGAGTATCGG CACTAGCTTT
GGGTCTGCCA ACCCGATTTG GGTCAACGAT ACCGATGCGG TTTATAACTT AGTCGGTCGG
GATGCTAATG GTGATCATCA AAGTGTCAAC CGGATGCAGG AATATTATGT TCAAGGCGAT
TGGTGGAATA CTCAATTCAG ATTAGGTGCC CAAGAGTTAC GCACGCCAAT GATGAATCCC
CATGATATCC GCGCCATACC TCGCACCTTC CGTGGCTTTT CAGCCGAAAA CCACAGCATC
GAAAATCTGA CACTATCAGC ACTCTATATC ACCGATTCTA TGGGATGGAC CGATGAACGC
TTTAACTCTG TGAGTGAAGC GGTAAAAGCT GAAGTCAAAC GCAATACCGG CAATGTGGTG
GATGTCGAAG ATAATCCTAT GTATGCCGTT GGTGCTAAAT ATCAGCTGCC CTTTGATACA
GTCAAAACTC AAATCAACCT CTGGCAATAC TATATGGAAG ATGTGTTCCA ACAGACCTAT
GCCAAGGTAA ATCTGTCGAC CCAGTTGGGC AGCACTAATC TGTACTTCAT TCCCTCCTAT
CTGAACCAGC AGGCAACAGG TAATAAATCC GCCGGTGAGC TGGATACTTA TCAATATGGT
TTTCACCTAG GAGCTAAATT TGCTGGTGTG GATGCCACTT ACATGTATGC CAAAACCGGT
GACGACACTG TTCTGACGCC ATGGGGCGAT GACAAGGTTG TGATTCAACA GGTATACCAA
TCCGCACTCG CCGATGAAGA AGTCAACGCC TTAAAACTGG AATACGACTT TGGCCAAGTC
GGAGCTAAAG GCCTAAGCGC CTATGCCTAC TATGGCGATT ATGATTCTCC CGAAAGTCTC
AATGACTTTA CCGAAACCAA CTTTTCTGTG ACCTACAAAT TTGCTGGTGT CTTGGAGGGA
CTGGGCGTAA GAGCTCGTTA TGCCATCGTC GATTTCGATC AGAAAGAAGA CCTCAATGAT
CTCCGCTTAT ATCTGACTTA CAAGTTCGCT ATAGGCCACT AA
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| Protein sequence | MMMKKSYLSL VVLSALAVPA IADTSIDKMF SEGTVKGELR LLDFTKDFDE GTTTQHTTSL
GGLFYYKTAK VNGLSIGTSF GSANPIWVND TDAVYNLVGR DANGDHQSVN RMQEYYVQGD
WWNTQFRLGA QELRTPMMNP HDIRAIPRTF RGFSAENHSI ENLTLSALYI TDSMGWTDER
FNSVSEAVKA EVKRNTGNVV DVEDNPMYAV GAKYQLPFDT VKTQINLWQY YMEDVFQQTY
AKVNLSTQLG STNLYFIPSY LNQQATGNKS AGELDTYQYG FHLGAKFAGV DATYMYAKTG
DDTVLTPWGD DKVVIQQVYQ SALADEEVNA LKLEYDFGQV GAKGLSAYAY YGDYDSPESL
NDFTETNFSV TYKFAGVLEG LGVRARYAIV DFDQKEDLND LRLYLTYKFA IGH
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