Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2769 |
Symbol | |
ID | 4258069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3278842 |
End bp | 3279693 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638123447 |
Product | hypothetical protein |
Protein accession | YP_738811 |
Protein GI | 114048261 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0260023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.123404 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACCCT TATTGATGAT TCTAGCTGCC CAATTATTGA TTGCCAGCGG TAACCTATTG GTTAAATTGC TTGAAACGAA TGCCCCCGTG TTTCAACTTG TGTTGTATCG CCAATTATTC GCCACGCTCT TAGTATTACC CTTTGTTTGG CGACTACAGG GAAACCTTAA GTTAAGCCCC TTTTACAAGG TGCACTTGAG CCGAGCATTG TTGATCGGCT TAGGCAATGC CATCTTTATG CTGGCGGTAC TGCACTTACC GCTGGCGACT GTGACTGCGG TCATTTATAC CTCCCCATTG TTACTGTTGC TGATGTCCGC CTTCTTTTTA AATGAGCGTA TAGGTTATCG TCGCACCGTT GCGGGGATTA TTGGTTTTAC GGGCATTTTG CTGATAAGCC AGCCGACGGA ATTTAACCTC TATATCGGTC TAGCCTTTTT TGGTGCTATG ACCTCAGCAA CTAACAGTCT CATTTTGAAG GCATATTCAA CCCATGAGCA TCCCTTTTCA ACACTCTTTT GGTCTAATGC CTTTGCCATG GTTTTTCTGA TACCGGCAAC CTGGTACGAA GGCGCCGACT TTAGCCTGCC CGTCGCCCAA GTTGGTTTGA CCTTAGGCCT GTTTTATATC GGTATGACCT ACTTCATCAT CCACGCCTAT CGGCGTGCCG ATGCCAGCCA AATGGCGCCC GTGGAATACA CTGGCCTTAT TTTTGCCGCA TTGTTTGGTT GGTGTTTTTT GGATGAGCAC TTAAGCATTG TGGTGTGTAT TGGCATAGGA CTGGTGATCT TCTCCTCCAT CCTGCCAAGC TACAGCGAAC TGAAAGCCAA ATGGAAAAGC CGGCGAAGTT AA
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Protein sequence | MAPLLMILAA QLLIASGNLL VKLLETNAPV FQLVLYRQLF ATLLVLPFVW RLQGNLKLSP FYKVHLSRAL LIGLGNAIFM LAVLHLPLAT VTAVIYTSPL LLLLMSAFFL NERIGYRRTV AGIIGFTGIL LISQPTEFNL YIGLAFFGAM TSATNSLILK AYSTHEHPFS TLFWSNAFAM VFLIPATWYE GADFSLPVAQ VGLTLGLFYI GMTYFIIHAY RRADASQMAP VEYTGLIFAA LFGWCFLDEH LSIVVCIGIG LVIFSSILPS YSELKAKWKS RRS
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