Gene Shewmr7_2769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2769 
Symbol 
ID4258069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3278842 
End bp3279693 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content47% 
IMG OID638123447 
Producthypothetical protein 
Protein accessionYP_738811 
Protein GI114048261 
COG category[R] General function prediction only 
COG ID[COG5006] Predicted permease, DMT superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0260023 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.123404 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACCCT TATTGATGAT TCTAGCTGCC CAATTATTGA TTGCCAGCGG TAACCTATTG 
GTTAAATTGC TTGAAACGAA TGCCCCCGTG TTTCAACTTG TGTTGTATCG CCAATTATTC
GCCACGCTCT TAGTATTACC CTTTGTTTGG CGACTACAGG GAAACCTTAA GTTAAGCCCC
TTTTACAAGG TGCACTTGAG CCGAGCATTG TTGATCGGCT TAGGCAATGC CATCTTTATG
CTGGCGGTAC TGCACTTACC GCTGGCGACT GTGACTGCGG TCATTTATAC CTCCCCATTG
TTACTGTTGC TGATGTCCGC CTTCTTTTTA AATGAGCGTA TAGGTTATCG TCGCACCGTT
GCGGGGATTA TTGGTTTTAC GGGCATTTTG CTGATAAGCC AGCCGACGGA ATTTAACCTC
TATATCGGTC TAGCCTTTTT TGGTGCTATG ACCTCAGCAA CTAACAGTCT CATTTTGAAG
GCATATTCAA CCCATGAGCA TCCCTTTTCA ACACTCTTTT GGTCTAATGC CTTTGCCATG
GTTTTTCTGA TACCGGCAAC CTGGTACGAA GGCGCCGACT TTAGCCTGCC CGTCGCCCAA
GTTGGTTTGA CCTTAGGCCT GTTTTATATC GGTATGACCT ACTTCATCAT CCACGCCTAT
CGGCGTGCCG ATGCCAGCCA AATGGCGCCC GTGGAATACA CTGGCCTTAT TTTTGCCGCA
TTGTTTGGTT GGTGTTTTTT GGATGAGCAC TTAAGCATTG TGGTGTGTAT TGGCATAGGA
CTGGTGATCT TCTCCTCCAT CCTGCCAAGC TACAGCGAAC TGAAAGCCAA ATGGAAAAGC
CGGCGAAGTT AA
 
Protein sequence
MAPLLMILAA QLLIASGNLL VKLLETNAPV FQLVLYRQLF ATLLVLPFVW RLQGNLKLSP 
FYKVHLSRAL LIGLGNAIFM LAVLHLPLAT VTAVIYTSPL LLLLMSAFFL NERIGYRRTV
AGIIGFTGIL LISQPTEFNL YIGLAFFGAM TSATNSLILK AYSTHEHPFS TLFWSNAFAM
VFLIPATWYE GADFSLPVAQ VGLTLGLFYI GMTYFIIHAY RRADASQMAP VEYTGLIFAA
LFGWCFLDEH LSIVVCIGIG LVIFSSILPS YSELKAKWKS RRS