| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2768 |
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| Symbol | |
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| ID | 4258068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 3276977 |
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| End bp | 3278644 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638123446 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_738810 |
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| Protein GI | 114048260 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.137361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.130437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA CTAACTTACA CAATTTCTGG TGCTTTTTGC TGCTTCTTTG GACATTTAGT
CCGTTTGCCT TTAGCGCTGA AATTGCGTTG GATTCCCCCT ATTTATTCCA TGCCGATGCT
AAACAACTTC CGCCCTCTGA CTTTAATCAA GTCACCCAAT GGATGAGCCA GCTTGAGGAA
GCCAGTTCGG TAAGTCTCGC CGGGGGCGAT TATTGGATGG TGTCTCCCGT AATGGTTAAC
AGTCGACAAA CCCATTGGGT GGTGGATGCC AGTAATTCCA TTGTCGAATC CGTCGATTAT
TGGTTGCTCG GCAGCGATGG TTCAGTGCAA TTCGCCCAGA GTGGTTACTA TGCGCCCTAT
GAGTTTTTAT TCGATTATGG CCGTAAAGTT AAGCTCAATA TGGGGACGGA TTATTGGTTA
GTGACTCGGC TGAGCAGCCG ATATTTTTCC TCTGCACCTG AGCTCGCTAT TGAGTCGGAA
GAAGTACACC AACTGACCAC GGATCGCATG GCCTTAGCCA TAATGATTTG TTTAGGAGGA
TTGTTTTTTA TTGCCCTCTA TAATCTACTG ATTTACTTCT CTATTTTTGA TAAGGCCTTT
ATGTATTACG GCCTGTATGT GTTGACCTAT TTTGGTGGTT GGGCCTTGAC CTTCCATTTA
CCGGCGCACC TATTCAACTT TCATCAGCTT GAGTTGCATC ATCTGTTTTT TATCAGTTTG
CCGATATTTA ACATCCTGTT CTACAAACAC TTCTTACAGC TTCCCAGCTA TTCGCCGCGA
TTATGGCGCC TTAGCAAGTA CCTGTTAATC GCCTGCATTT TAGCTCTGCC AACCAGTATC
TGGTTATTGT CCTACACCGC GATTATTGCC TCGGTATTAA TCATGCTGTG GATTGCACTG
GCCATTACCT GCGGCAATGT CTGTTTGATG AAAGGCTTTG CTCCCGCCCG TTATTTTATT
ATGGCTTTTA GCTGCTTATT GCTGCCAGCG TTAATTATTC TTCCGGGCAA TATGGGGATC
ACCCCAGATT TTATCGAACA TGCCGAGTTT GCCACGCTGT TGGGCGGCAC TGTGGATGCC
CTGTTGTTAT CCCTCGCGTT AGCGAACAAG CTTAAACTCC TATCAGAGGA ACGTAAGGCG
CATATTGAAG AGTTAGGAAT CGCTTGGGAA AAGGCTAGGC TCGATGGTTT AACTCGGGTC
GGTAATCGTT ATGCCTTTGA TGAGTTTATG AATTCACAAT TGGCCTTTGG CAAAAAAGTG
GTTCAGCCAA TGGCTTTGGT GTTGCTCAAT GTCGACAGCC TTAAAATGGT GAACGATACC
TTAGGGCATC AAGAGGGCGA TCGTTTACTG CAACACTTAG TACAGGTTTT GCAGGCGACT
AATATTGCCC ACCTTAAAAT TTATCGGATC AGTGGCGATG AGTTTGTGCT GATCCTGCCC
GCAAATGGCA TGGGGATCTT AACCAGCAGC TTAAAGGGAT TAACGGCACA ATTTGCAGAA
GAAGGCTTGA AGGATTGCCA GTTTAGTTTT GGTTTTGCTA TCGATAGCGA GGTGGCAGAT
CCCCACGAGT GGCTTCGCAG CGCCGATAGC AGTTTGTATC AGTCGCGGAT GGAAAAGCGC
CGTCAGGAAT ACGCCGATAC CCGCGCGGGC GAGATTGTCT CGATTTAG
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| Protein sequence | MSKTNLHNFW CFLLLLWTFS PFAFSAEIAL DSPYLFHADA KQLPPSDFNQ VTQWMSQLEE
ASSVSLAGGD YWMVSPVMVN SRQTHWVVDA SNSIVESVDY WLLGSDGSVQ FAQSGYYAPY
EFLFDYGRKV KLNMGTDYWL VTRLSSRYFS SAPELAIESE EVHQLTTDRM ALAIMICLGG
LFFIALYNLL IYFSIFDKAF MYYGLYVLTY FGGWALTFHL PAHLFNFHQL ELHHLFFISL
PIFNILFYKH FLQLPSYSPR LWRLSKYLLI ACILALPTSI WLLSYTAIIA SVLIMLWIAL
AITCGNVCLM KGFAPARYFI MAFSCLLLPA LIILPGNMGI TPDFIEHAEF ATLLGGTVDA
LLLSLALANK LKLLSEERKA HIEELGIAWE KARLDGLTRV GNRYAFDEFM NSQLAFGKKV
VQPMALVLLN VDSLKMVNDT LGHQEGDRLL QHLVQVLQAT NIAHLKIYRI SGDEFVLILP
ANGMGILTSS LKGLTAQFAE EGLKDCQFSF GFAIDSEVAD PHEWLRSADS SLYQSRMEKR
RQEYADTRAG EIVSI
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