| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2734 |
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| Symbol | |
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| ID | 4258734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3235550 |
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| End bp | 3237820 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123412 |
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| Product | omega-3 polyunsaturated fatty acid synthase PfaB |
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| Protein accession | YP_738776 |
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| Protein GI | 114048226 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3321] Polyketide synthase modules and related proteins |
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| TIGRFAM ID | [TIGR02816] PfaB family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGAGTG TGCTTAGCCA TGCACCAACC GATGTCAGTA AGCTGCAGCA GTTGATGGCT
TGTCGAATTC AGCTCAATGT TGAAGATAAG CCACTAATTA ATGAGCCATC TGATGAGCCA
ACACTGGTCG CCTTGCTCAC AGAGCAACTC GACCATATTG CGCAAAAACA GCTCGTTGAA
ATTCGCTTTG AATATCAGCA GCAAGCACGT AGCCTGTATC TGCTCGATGG GCTGATGGCA
GCGCAGTTAC ACCTGCATGC CGAGGCTTAT ATTTCAGCAT TAGCGCAAAT CCAAGCTGAA
ACAGCCGAAG AAACAAATAC TATCAATACA AATATCGTCG AGCGCTGCTT AAACAGCGCT
TTTATCTTGG CGAAACGCGA TTGTGCTCAG GCGGTTAATA GTTACGCGCA GGCAGGCAAT
CTTGCCAGTC AGTTGAATGT ATTATCTCAA GCGGTTGAGG CGTTAAGTCA TCGCAGCCTC
AAAGGCATTG AACCAATGCT TGATGCGACT GATGCAGCGC AACTGGCAGA ACTACTCGCT
GAACAACACG CTGAACTGCG CGCTGAAAAG CCCGTAAAAA ACGTGCAGAA CGGTTATTGG
TTTACTAAGC CTCATCAGGC AAGGGTATTA AGCCTAAATC TCATCGGTAA AGTCCCTAAA
ACTCAAACAG CCCAAAGCCT TATCTTGACC CAAGGCACTC GGCTTATCGC TCAGCCGTTG
CTCAATGCCA ACAGACTGTT TATTCCCATT AGCGGCAATA CACATGAGTC TTTAACGGCA
CAGTTATCAC AACTAATTGA TTCATTAGAT TTATCGGCGT GCTTACCTGA TACGGATTGG
CTCAGCAGCC AAGGCAATAA TTGGTTTGAG CGTTATCGAG CACAGGATAA ATTAGCCCTA
GTGCTGATGG CCGGCTCCCT TGAAGAGCTT ATGCAAGAAG CCAAGGCGAT GCGCGCTTAT
ACTGAAAAGA CGCAACAGGC TCCTGCGCCA GCTCCAGCCC AAACGCCAGC GTCAATGCCA
TCGGCCAATC TAGCCTTTAA GACCCCTGCG GGCAGTTATT TTACGCCAAC GCCCCTCGGC
GATACGGGCT TAACCTTTGT CTACCCCGGC GTCGGCACGG TTTACCCGAA TATGTTCAGC
GACTTACATA GCTATTTCCC TGAGCTTTAT CGTGAGCTTG AACGTGAAGG GGATTTAGCC
GCCATGCTGC AGGCCGAGGC GAGTTACCAA GGCACAAATA ATACGAAAAG CACAGAAAAA
GATTCGGCAG AGATGAGCTT AAGCCAACTT GCGATTAGCG GTGTTGGCGC CAGTTACCTT
TTTAGTCGAC TGCTAACTCG AGTCTTTAAT ATCCAACCGC AACTCGCTCT GGGCTATTCC
ATGGGTGAAG CGGCCATGTG GGCAAGTTTG GATATTTGGC AAACGCCACA TGCCCTGATT
AACGCCACCC AAAACAGCGC CATCTTCAAT CAGGAGATTT CAGGCCCACT GCTTGCGGTG
CGCCGCGATT GGCAGTTGAA TGAAGATGCA CCGCTGGCGT GGAACAGCTT TTTAGTGCGA
GCCTCTCGCG CCGAAATTAA TGCCCTGCTG AATGATTTTC CACGGGTTTA TCTGGCCATC
GAACAGGGCG ATACCTGTAT TCTCGCGGGC TGCGAAGCAA GCTGCTTACA ACTCCTTAAA
AGGCTGAATA AGCGTGGCAT TGCCAGCAAT AAAGTCACCG CCATGCATAC CCCGCCCTCG
CAGTCACAGC ACAACGCTAT CCAAGGATTT TATACCTTGG GCTTAAAGGC TAATGCCTGC
GAGACTCAGG TGCGTTTTAT TAGCGCGGCG CAGCAAAGCG CCGTCAGCAT CGATAGCCAA
AGCATTGCCA AGAGTATTGC CGACACCTTT TGTGCGCCGC TGAATTTTAC CGCGCTGATT
AACACCGCGT ATCAACAAGG TGCGCGTTTA TTTGTTGAGG TGGGCGCCGA TCGGCAAACC
AGCACACTTA TCGATAAAAT CGGCCGCCAA CTAGAGTTGG GCGCCGATGG CGTTCAAACA
CAGGAACAAT CGATATTAGC CATGGCATGC AATGCCAAAG GCAGCGATAC GATCACCAGT
TTACTCAAGT GCTTAGCTCA ACTTATCAGC CATAGAGTGC CACTCTCCCT TGCACCGCTT
ATGCCTCAAT CGGCAGATAA GGCTACAGCG AAAACGATAG CGCCACATTC AGCCAGCGCC
AGCGCATTAG GCCATTATTC AAACGTATTC CAAGAAGGAG AACCTCTTTG A
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| Protein sequence | MQSVLSHAPT DVSKLQQLMA CRIQLNVEDK PLINEPSDEP TLVALLTEQL DHIAQKQLVE
IRFEYQQQAR SLYLLDGLMA AQLHLHAEAY ISALAQIQAE TAEETNTINT NIVERCLNSA
FILAKRDCAQ AVNSYAQAGN LASQLNVLSQ AVEALSHRSL KGIEPMLDAT DAAQLAELLA
EQHAELRAEK PVKNVQNGYW FTKPHQARVL SLNLIGKVPK TQTAQSLILT QGTRLIAQPL
LNANRLFIPI SGNTHESLTA QLSQLIDSLD LSACLPDTDW LSSQGNNWFE RYRAQDKLAL
VLMAGSLEEL MQEAKAMRAY TEKTQQAPAP APAQTPASMP SANLAFKTPA GSYFTPTPLG
DTGLTFVYPG VGTVYPNMFS DLHSYFPELY RELEREGDLA AMLQAEASYQ GTNNTKSTEK
DSAEMSLSQL AISGVGASYL FSRLLTRVFN IQPQLALGYS MGEAAMWASL DIWQTPHALI
NATQNSAIFN QEISGPLLAV RRDWQLNEDA PLAWNSFLVR ASRAEINALL NDFPRVYLAI
EQGDTCILAG CEASCLQLLK RLNKRGIASN KVTAMHTPPS QSQHNAIQGF YTLGLKANAC
ETQVRFISAA QQSAVSIDSQ SIAKSIADTF CAPLNFTALI NTAYQQGARL FVEVGADRQT
STLIDKIGRQ LELGADGVQT QEQSILAMAC NAKGSDTITS LLKCLAQLIS HRVPLSLAPL
MPQSADKATA KTIAPHSASA SALGHYSNVF QEGEPL
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