| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2551 |
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| Symbol | |
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| ID | 4257450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 3011273 |
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| End bp | 3012361 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638123226 |
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| Product | Fis family transcriptional regulator |
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| Protein accession | YP_738593 |
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| Protein GI | 114048043 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0309861 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATAATA AATTTCAGCA AGACAACCTC ATCGGCCAAT CAAACGCCCT ACTCGAAGTC
TTAGAGCATG TGTCACAGAT AGCGCCGCTC TCTAAACCTG TGCTCATTAT TGGTGAACGG
GGTACGGGTA AGGAGCTGAT TGCTGAACGT TTACATTATC TGTCTAAACG CTGGGATCAA
AGTTTTATTA AGCTAAATTG TTCATCTTTG AGTGAAAACT TACTCGAGAG TGAGTTATTC
GGTCATGAAT CGGGCGCCTT TACTGGCGCA AAAGGCAAAC ACGAAGGCCG CTTTGAGCGA
GCCGACGGTG GCACTCTCTT CCTCGATGAA TTAGCTAACA CCTCGGGGTT AATCCAAGAA
AAACTGTTGC GGGTCATCGA ATACGGTGAG TTTGAACGGG TCGGCGGCAG TAAAACCATT
CAAGCGGATG TGCGCCTTAT CTGCGCGGCC AACGAGGATT TACCCTCACT GGCCGACGCT
GGTGAATTTA GGGCCGACTT GCTCGACCGT TTAGCATTCG ATGTGATCAC CTTACCGCCG
CTGCGTTGCC GCCCCGAAGA TATCATGACC TTAGCCGAAT ATTTTGCCGT AGGTATGGCG
CGGCAACTTA AGCTGGAACT CTTCAGTGGC TTCAGTGCCA GCGCAGTCGA TCAGCTGATG
AGTCATGACT GGCCGGGGAA TATCCGTGAA CTAAAAAACG TGGTCGAGCG CAGTGTGTAT
CGCAGCAGCG GTGAAAATCG TCCCATTGAG CAGATTATTC TCGATCCCTT TGCCTCACCC
TATCGCCCCA CCACTCGAGT GCGTACCCGC GAGCGTCAAG TCACAACACC TCAAGCGCAG
CTTGTAAGTA CATCCGTCGC GGCCCCGACA ATCGACACCG AGGTTGCAGT TAATACTGAG
GTTATGACAA ATAATTTTAG TTTTCCCTTG GACTTTAAAG AGCAAACCGA ACGTTATGAG
ATGGAGCTTA TTCAACAAGC CTTATCGGCC AGTCAGTACA ATCAAAAGAA AACCGCCGAA
ATCCTTGGTT TAAGCTATCA CCAGCTGCGT GGCATCTTGA AAAAGTACAA TTTGCTCGAT
AAAGCATAA
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| Protein sequence | MDNKFQQDNL IGQSNALLEV LEHVSQIAPL SKPVLIIGER GTGKELIAER LHYLSKRWDQ
SFIKLNCSSL SENLLESELF GHESGAFTGA KGKHEGRFER ADGGTLFLDE LANTSGLIQE
KLLRVIEYGE FERVGGSKTI QADVRLICAA NEDLPSLADA GEFRADLLDR LAFDVITLPP
LRCRPEDIMT LAEYFAVGMA RQLKLELFSG FSASAVDQLM SHDWPGNIRE LKNVVERSVY
RSSGENRPIE QIILDPFASP YRPTTRVRTR ERQVTTPQAQ LVSTSVAAPT IDTEVAVNTE
VMTNNFSFPL DFKEQTERYE MELIQQALSA SQYNQKKTAE ILGLSYHQLR GILKKYNLLD
KA
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