| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2541 |
|---|
| Symbol | |
|---|
| ID | 4257440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 3002559 |
|---|
| End bp | 3003251 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 638123216 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_738583 |
|---|
| Protein GI | 114048033 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3110] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.688217 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00185195 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCAC TTTTGCCAAT CAGCAGCCTG CTAGTGCTAC TCGGCTCTGC CTCAGCCTTT
GCCGCAGATC TGAATATCCC TATGTCCTTC GAATACCTTG CCCTCGATGG CAAAAAAGTC
GAGTCCAGTG TATTCAATCA TAAAAGCAGC TTAGAGTTGG CGCCGGGCAC TCACAAAATC
GCCATCCGTT ACCACGAAAT GGTTGAAGAC GATTTCAGTG ACAGCCAAAC CTTCGTCAAG
TCATCCCCTT TTATCCTGAC CTTAGAAGTG GACGGCGATC ATCAATATTA TTTGCAAGCC
GCTGAGGGCA AGGTCGTTAA AAAACCTAAA ACCTTCGCTC AAAATCCTCA GGTCGTATTA
ACCCGCTCTG ACAAAGGTCA GGTGAATTAC AAAGTGACAA ACACCGACAT TGAAGAAGAG
AGCTTTGTCT CTCGTCTCTT TAGCGGTAAC CAAGCGGTAG ATGTGTCAGG TACTGCCGCC
GCTGCAACGG GCGCAGCAGG CACAGCGGCG GTTGTTGCCG CGCCGGCACC CACTTCGGCG
CAGGCAGCTG TGAACGCTAC CTCATTAACC GCTCCGGTTG ATACTTCTAA AGCAGCGGGC
GCGAATCCAC AGCAGATGTT GCAATACTGG TGGTTACAAG CCGATGAGAA AACACGTAAA
GAGTTTATGA GCTGGGCTAT TTCACAACTC TAA
|
|---|
| Protein sequence | MKSLLPISSL LVLLGSASAF AADLNIPMSF EYLALDGKKV ESSVFNHKSS LELAPGTHKI
AIRYHEMVED DFSDSQTFVK SSPFILTLEV DGDHQYYLQA AEGKVVKKPK TFAQNPQVVL
TRSDKGQVNY KVTNTDIEEE SFVSRLFSGN QAVDVSGTAA AATGAAGTAA VVAAPAPTSA
QAAVNATSLT APVDTSKAAG ANPQQMLQYW WLQADEKTRK EFMSWAISQL
|
|---|
| |