Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2540 |
Symbol | |
ID | 4257421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 3001881 |
End bp | 3002549 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638123215 |
Product | primosomal replication protein N'', putative |
Protein accession | YP_738582 |
Protein GI | 114048032 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00171474 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTTTGA ACACTTCGCA GCTAATCAGC ACGTTGAAAA ATCAGCTCAC AACACTTGAG CAAGAAGTCC TGCAACACGA CAGTCATCTT GCGCCGAGCC AGCGTAAACT TCTGCAGGAT ATTGAGCGCT TTAATCAGTC GCTGTTTATT CAAAATGGCG CCCAGCTGAT GCCTTGCATT GAACAAATTC GTAATAGTAT CGGTCAGTTA GAGAAGCAAA TCGCCCTAAA ACTCGCGCCG CAAACCATCG CCTTAAGCTG TGAACGTATT CAAGACCGTT TTACCGCGGT TAAACGGGCG CTACTGACGA CCTCAATCGA TATAAAGTCT AAAAATCAAC AACGTGCCAG TAAACGTGCG CGTTATGCCC AACAACAGAC CCAATCGCAC CAAGCCAGTG GGTTTGCTTG GATTGCCAGC AATGTGTTAC AAAATAGCCA CGAAATCTAT GCCGAATTGA ATAAGCATCT GAATTGGGCT AATAAATTTG AACAAAAAAT TGCAGAAATG GAGTCAAAAC TTGAAAACTG TCATAGTGCT GACAAAATCC GTTTGCAAAA TGACATCCTT TTGATGCATC GTCGTTTGGG TAAATGCAGG CAAGCCATCA GTTATATCGA AGATCGCATT CAAGCATTCG AACGTCCGCA TCAGAGCCAT AATCGTTAA
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Protein sequence | MVLNTSQLIS TLKNQLTTLE QEVLQHDSHL APSQRKLLQD IERFNQSLFI QNGAQLMPCI EQIRNSIGQL EKQIALKLAP QTIALSCERI QDRFTAVKRA LLTTSIDIKS KNQQRASKRA RYAQQQTQSH QASGFAWIAS NVLQNSHEIY AELNKHLNWA NKFEQKIAEM ESKLENCHSA DKIRLQNDIL LMHRRLGKCR QAISYIEDRI QAFERPHQSH NR
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