Gene Shewmr7_2540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2540 
Symbol 
ID4257421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp3001881 
End bp3002549 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content44% 
IMG OID638123215 
Productprimosomal replication protein N'', putative 
Protein accessionYP_738582 
Protein GI114048032 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00171474 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTTTGA ACACTTCGCA GCTAATCAGC ACGTTGAAAA ATCAGCTCAC AACACTTGAG 
CAAGAAGTCC TGCAACACGA CAGTCATCTT GCGCCGAGCC AGCGTAAACT TCTGCAGGAT
ATTGAGCGCT TTAATCAGTC GCTGTTTATT CAAAATGGCG CCCAGCTGAT GCCTTGCATT
GAACAAATTC GTAATAGTAT CGGTCAGTTA GAGAAGCAAA TCGCCCTAAA ACTCGCGCCG
CAAACCATCG CCTTAAGCTG TGAACGTATT CAAGACCGTT TTACCGCGGT TAAACGGGCG
CTACTGACGA CCTCAATCGA TATAAAGTCT AAAAATCAAC AACGTGCCAG TAAACGTGCG
CGTTATGCCC AACAACAGAC CCAATCGCAC CAAGCCAGTG GGTTTGCTTG GATTGCCAGC
AATGTGTTAC AAAATAGCCA CGAAATCTAT GCCGAATTGA ATAAGCATCT GAATTGGGCT
AATAAATTTG AACAAAAAAT TGCAGAAATG GAGTCAAAAC TTGAAAACTG TCATAGTGCT
GACAAAATCC GTTTGCAAAA TGACATCCTT TTGATGCATC GTCGTTTGGG TAAATGCAGG
CAAGCCATCA GTTATATCGA AGATCGCATT CAAGCATTCG AACGTCCGCA TCAGAGCCAT
AATCGTTAA
 
Protein sequence
MVLNTSQLIS TLKNQLTTLE QEVLQHDSHL APSQRKLLQD IERFNQSLFI QNGAQLMPCI 
EQIRNSIGQL EKQIALKLAP QTIALSCERI QDRFTAVKRA LLTTSIDIKS KNQQRASKRA
RYAQQQTQSH QASGFAWIAS NVLQNSHEIY AELNKHLNWA NKFEQKIAEM ESKLENCHSA
DKIRLQNDIL LMHRRLGKCR QAISYIEDRI QAFERPHQSH NR