Gene Shewmr7_2532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2532 
Symbol 
ID4257413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2988715 
End bp2989242 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content46% 
IMG OID638123207 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_738574 
Protein GI114048024 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0137546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000227076 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGATGATTC ACCTGATGGA CATATGGGAT TCCGTCAGGG GCTTCATGGC CTCCGGAGGC 
GACGTCCTCT GGTTAGTAGC GTTTGTGCTG TTCTTAATGT GGGTATTGAT GCTTGAGCGT
TACTGGTATC TAAATTGGAT ATCACCAAAG CAACATAAAG CAATCATAGC TGCATGGGAT
GCTAGAGAGG AAACTACCTC TTGGTATGCA CACCGTATCC GTGAAGCTTG GCTGTCCCAA
GCGAAGCAAG ATTTGAATGC ACGTATGCTG GTCATTAAAA CCTTAGTAGC GATTTGTCCT
ATGATAGGTT TGTTAGGTAC TGTTACCGGT ATGATTTCAG TGTTCGATGT GATGGCAGTT
CAGGGGACGA GTAATGCTCG TTTAATGGCG GCTGGTATTT CAATGGCAAC AATGCCCACT
ATGGCGGGGA TGGTTGCAGC ATTATCGGGA GTATTCTTCA GTACTCGCCT TGATGCAAAA
ATGAAAATCA GCTTAGAAAA GCTAAAAGAC AGCATGCCGC ACCACTAG
 
Protein sequence
MMIHLMDIWD SVRGFMASGG DVLWLVAFVL FLMWVLMLER YWYLNWISPK QHKAIIAAWD 
AREETTSWYA HRIREAWLSQ AKQDLNARML VIKTLVAICP MIGLLGTVTG MISVFDVMAV
QGTSNARLMA AGISMATMPT MAGMVAALSG VFFSTRLDAK MKISLEKLKD SMPHH