| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2481 |
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| Symbol | |
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| ID | 4256370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2938318 |
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| End bp | 2939208 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638123156 |
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| Product | cytidine deaminase |
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| Protein accession | YP_738523 |
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| Protein GI | 114047973 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0295] Cytidine deaminase |
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| TIGRFAM ID | [TIGR01355] cytidine deaminase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.580648 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.218943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGATA GATTTATCAG AAGCATAACC CAGCTGCCAA CACCATTGGC TGACGCATTA
ATTCCCCTAT TACATCAAAA CTTTGCGGGA CATATTGATG CACAGCAACT GGCAGAGTTA
GTCCAAAGCA GCCAAATGAC CGAAGCCGAA GTGTTACTGG CACTGCTGCC TATTGCCGCC
GCCTTAGCAA AACCGCCGAT CAGCGAGTTT TATGTCGGAG CGATTGCCAA AGGCAAAAGT
GGCGACATCT ATATGGGCGC CAATTTAGAA CTGCCCGGCG AGGCCCTGTT TCACTCAGTG
CATGCGGAGC AAAGCGCCAT CAGCCACGCA TGGTTAAGTG GCGAGAGCCA AATTGTCGAC
ATGATAGTCA ATGCCAGCCC CTGTGGTCAT TGCCGTCAGT TTATGAACGA ACTCGTCGAG
GGTGGCCAAA TTAAGATCCA TCTGCCATCG CAAGACAGTC ATTTACTGTC CTATTACTTA
CCCTACGCAT TTGGACCAAA GGACTTAAAT GTGCAGTCGC CCTTGCTGGT CAAGCATGAA
ACCGAATTTG CCCTCGATAG CAGCGATCCT ATGGTGATTG AAGCATTAGA TCATGCGGGT
TTAAGCTATG CGCCTTATAC CCAAAGTTAC GCGGCGGTCG TATTAGAAAC GGCCGATGGT
GCAACCTATT GTGGTCGCTA CGCTGAAAAC GCAGCCTTTA ACCCATCTAT GCTGCCAATG
CAGATGGCCT TATCGAATCT GACTCGACAT AACCGCGATT TTGGCGAGAT CCGCCGTGCG
GTGTTGGTCG AGTCATCACA GGGGAAAATC AGCTTAGTGG GCGCAACCAT GGATGCCTTA
CATCCCGTTG CCGCCATCGA ACTTGAGCAT ATAGTGGTCG ATCCTGTCTG A
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| Protein sequence | MQDRFIRSIT QLPTPLADAL IPLLHQNFAG HIDAQQLAEL VQSSQMTEAE VLLALLPIAA
ALAKPPISEF YVGAIAKGKS GDIYMGANLE LPGEALFHSV HAEQSAISHA WLSGESQIVD
MIVNASPCGH CRQFMNELVE GGQIKIHLPS QDSHLLSYYL PYAFGPKDLN VQSPLLVKHE
TEFALDSSDP MVIEALDHAG LSYAPYTQSY AAVVLETADG ATYCGRYAEN AAFNPSMLPM
QMALSNLTRH NRDFGEIRRA VLVESSQGKI SLVGATMDAL HPVAAIELEH IVVDPV
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