Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2311 |
Symbol | |
ID | 4256900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2742080 |
End bp | 2742793 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638122980 |
Product | hypothetical protein |
Protein accession | YP_738355 |
Protein GI | 114047805 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.551443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00791076 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAAATGA GATTATTAGT TGGAGTATTT TTCAGTCTTT TCTCCACATT ATCCAGCGCA GTGTATCTCG ACAAAATGAT GCAGATTTCG GATGAAAACG GCAACGCATC GTTCATTGTG ACTAATGATA AAGAGATGGT TTATTTCGTT GAAACGAAAA TCAATGAAAT TGTGACCACG GAAGATGGCG GATTAGTGCG TAAACCATAT ACACGCGAAA ACTTGTCGGA ATGGACAGTC GCTGTCAGTA ACCCCAGATT CATTATTGAA CCAGGTAGAA CAAAAAGTCT TGGTATTCGA GCAATCTGTG GGGGCAGCTG CTCATGGGAT GAAGATCGCA CCTACGAAAT CGTTTTTGTG CCAAAGCCGT ATGCTAACGC CACTGAGTCA GGCGAACAAT CAGTGAATAT TTTCGTTGGT TATGCTCCGG TATTAATTGT TCCAGCTAAA GAGCCAAAGA TTGATTACGA CATTGATGTT GCGGGCAAAA GTCTGTCTAT CCATAACAAA GGCAATACTA TGCTTCGAGT ATTGATTGAT AACTGTCAAG GTGTGAAAGA AAGCTCGTGT CGTGTTTTCT ACACCCTGAT AAAGGGTAGA AAAAAGAGCT TTGATTTACC AAAAGGCTTA GTAAATAAAG ATCTCAATGT CACGGTATTA AACCATGACG AAAGCTATCG AAATAAGATC GTCGTTCCTG GTAAAGGGCG CTAA
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Protein sequence | MKMRLLVGVF FSLFSTLSSA VYLDKMMQIS DENGNASFIV TNDKEMVYFV ETKINEIVTT EDGGLVRKPY TRENLSEWTV AVSNPRFIIE PGRTKSLGIR AICGGSCSWD EDRTYEIVFV PKPYANATES GEQSVNIFVG YAPVLIVPAK EPKIDYDIDV AGKSLSIHNK GNTMLRVLID NCQGVKESSC RVFYTLIKGR KKSFDLPKGL VNKDLNVTVL NHDESYRNKI VVPGKGR
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