Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2167 |
Symbol | ihfA |
ID | 4257648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2564620 |
End bp | 2564916 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122835 |
Product | integration host factor subunit alpha |
Protein accession | YP_738212 |
Protein GI | 114047662 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0460926 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTTA CCAAAGCCGA AATGGCAGAA CATCTTTTTG AAACACTAGG TATTAACAAG CGTGTCGCCA AAGAGATGGT TGAGTCGTTC TTTGAAGAAA TTCGAGGCGC ACTTGAAAGT GGTGAGCAGG TCAAGTTATC TGGCTTTGGC AACTTTGACC TTAGGGATAA GAATCAAAGA CCGGGAAGGA ACCCAAAAAC AGGCGAGGAT ATCCCGATTT CCGCTCGCCG TGTCGTGACC TTCCGTCCCG GCCAGAAACT GAAAACTCGC GTAGAAGCAT CTAACGCGGG CAAGTAA
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Protein sequence | MALTKAEMAE HLFETLGINK RVAKEMVESF FEEIRGALES GEQVKLSGFG NFDLRDKNQR PGRNPKTGED IPISARRVVT FRPGQKLKTR VEASNAGK
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