| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2126 |
|---|
| Symbol | |
|---|
| ID | 4255541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | + |
|---|
| Start bp | 2515539 |
|---|
| End bp | 2516609 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 638122794 |
|---|
| Product | iron-containing alcohol dehydrogenase |
|---|
| Protein accession | YP_738171 |
|---|
| Protein GI | 114047621 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0147626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000187018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTTA AAAATTTTAA AGTAGTTGAA AAGATGATCT TCGGTCGTGG CTCCTTCGCA
CAATTAGACG AAGTATTAGC TGCACAGCGT AAGGCCGACG ATGACTTCGT GGTATTTTTA
GTCGATGACG TTCACCAAGG CAAACCACTC GAAGCACGCA TCCCTGTAAA AGCCCAAGAC
TTACTTATTT GGGTTAACGT TGATGAAGAG CCAAGCACAA TTCAAATCGA CACCTTAACT
GAGCAGGTTC AAGCTTTTAA TAGCAAATTG CCAGTCAGTG TTGTGGGTTT AGGTGGCGGT
TCAACCATGG ACGTGGCAAA AGCGGTATCA CTGATGCTGA CCAACCCAGG CGGCTCTGCC
ATGTACCAAG GTTGGGATTT AATCAAAAAA CCAGCGGTTC ACCACATTGG TATTCCAACG
ATTTCAGGTA CCGGCGCTGA AGCGTCACGC ACCGCAGTAT TATGTGGTCC AGTGCGTAAA
CTGGGTCTTA ACTCAGATTA CACAGTGTTC GACCAAATCA TCATGGACTC TGAGTTAATC
GAAGGTGTTG AAACTGACCA ATGGTTCTAC ACAGGAATGG ATTGCTATAT CCACTGCGTT
GAATCATTAG AAGGTACCTT CTTAAACGAA TTCTCTAAGT CATACGCCGA AAAAGCCATG
GAGCTTTGCC GCCAAGTGTA CTTAGAAGAT CACCCAGAAA AAGACGACAA GCTGATGATG
GCGTCATTTA TGGGCGGTAT GAGTATCGCT TACAGCCAAG TGGGTGCATG CCACGCGGTA
TCTTATGGTC TGTCTTACAT CCTCGGCTAC CACCATGGTA TCGGTAACTG TATCGCCTTC
GACGTGTTAG AAGAATTCTA TCCAGAAGGT GTGGCTGAAT TCCGTCTGAT GATGAAGAAG
CACAACATCA CTCTGCCGAA GAACATCTGT AAAGATCTGC CAGATGAAAC CATCGCGAAA
ATGGTTGCCG TGACTAAGAG CATGGGTCCA TTATGGGCAA ACGTGTACGG CCCAACATGG
GAAGAAAAAG TCACTGACGA AATGTTGACT GCGCTGTTCC GTCGCATTTA A
|
|---|
| Protein sequence | MSFKNFKVVE KMIFGRGSFA QLDEVLAAQR KADDDFVVFL VDDVHQGKPL EARIPVKAQD
LLIWVNVDEE PSTIQIDTLT EQVQAFNSKL PVSVVGLGGG STMDVAKAVS LMLTNPGGSA
MYQGWDLIKK PAVHHIGIPT ISGTGAEASR TAVLCGPVRK LGLNSDYTVF DQIIMDSELI
EGVETDQWFY TGMDCYIHCV ESLEGTFLNE FSKSYAEKAM ELCRQVYLED HPEKDDKLMM
ASFMGGMSIA YSQVGACHAV SYGLSYILGY HHGIGNCIAF DVLEEFYPEG VAEFRLMMKK
HNITLPKNIC KDLPDETIAK MVAVTKSMGP LWANVYGPTW EEKVTDEMLT ALFRRI
|
|---|
| |