Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_2088 |
Symbol | |
ID | 4258355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 2465378 |
End bp | 2466577 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638122756 |
Product | hypothetical protein |
Protein accession | YP_738133 |
Protein GI | 114047583 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.450369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAGG ATCTGAAAAT CACCCACACA CCACAACCGA AACACAAACT CACACTACCC ATTGCGCTTT TTAGCGGTTT AGCCTTCTTT ACCGCACAGA GTGCTTTAGC CAACACGCAA AGCACGCCCC TAAGTTACGC TGGGCTTGAG TACTCACAAA ACGTACTCAT GCCAAACGCC GCGGATAAAA CCGAATTAAG CCAAAGCGAC ATTGCGCAGC TTATTCAACA GAACCTTGAA ACCCATCTCT ATACACTCCC GCCTCGGGTG CAGGGCCATT ATGGGATCCG CCTCTATCGC CTGACGGGCG ATGAGCAATA TGCCAACGCG GCGTTAGTCG ATCTTTATGC GGTAACCGAA GCTCAAGCGT TTTATGCCTG CCAAATGGAT AACCCTGAGT TTGTACGCCA AGCCTCACAG AACGCCATCG ACGAACTGGG CAATGGTCCC AGAGCCAAGG CCCGTAAAAA AGCCCTCGCG CCCTTTCCTG AGTTTTTATT TTACTCCGAT GTGCTATTGC GATTTGCCAG TCGAATCGAT GAGTTAGGCT TTACAGGTCC TTGCCATAGT CAAATGCTCC AAACCCTCAA AAAGGCTGAC TTACGCCAAG GTTTAACCGA TCCCGCAATG ATTAAAGCCT GGGCGGCGCA GCTGATTAAC TATGTGTATT GGGCCAAACA ATTGGGTGTA GGAGATTATC TAGAGGACTA TAAAACAGCG TTTACTCGGG TTTATCCTGA TTCGCAGGAT GCCACACTCA GCAAAGCACA GTTTCGCAAT AAGCTCTACG GCATGACGCA TTTTATCTTT GCCGCCAGTG AATATTATCA GCATCGAGTG GATGCCACTG AGTTTGCATG GATTTTGGAC TATTTTGACG CAAACATTGA GCGAATTTTA CAGGATGCGA CCGACGATAT TATTGCCGAA GTCGGCATTA GTTTTCTGCT AGCGGGCAAG ACAGACCATC CTGTCGTGGC TCAAACTCGG GCGTATATTG CCAACTCGTT CGACCCTGAT AGTCAAATTA TCCCCTCACC CAAGGGCAAT CCTGACTTAG CCCTTGGTGA GCATCGTAAT GTGCTTGCGA TAATGTTACT TAATTGGCCA GAAACCCTCT ATCCCGGTCC CTACCTTAAC GAACTTAACG CGACGAAAAA GTATTTACCT ATGGGCGTGA CGCCTAAGGT TATCGATTAA
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Protein sequence | MSQDLKITHT PQPKHKLTLP IALFSGLAFF TAQSALANTQ STPLSYAGLE YSQNVLMPNA ADKTELSQSD IAQLIQQNLE THLYTLPPRV QGHYGIRLYR LTGDEQYANA ALVDLYAVTE AQAFYACQMD NPEFVRQASQ NAIDELGNGP RAKARKKALA PFPEFLFYSD VLLRFASRID ELGFTGPCHS QMLQTLKKAD LRQGLTDPAM IKAWAAQLIN YVYWAKQLGV GDYLEDYKTA FTRVYPDSQD ATLSKAQFRN KLYGMTHFIF AASEYYQHRV DATEFAWILD YFDANIERIL QDATDDIIAE VGISFLLAGK TDHPVVAQTR AYIANSFDPD SQIIPSPKGN PDLALGEHRN VLAIMLLNWP ETLYPGPYLN ELNATKKYLP MGVTPKVID
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