Gene Shewmr7_2088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_2088 
Symbol 
ID4258355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2465378 
End bp2466577 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content48% 
IMG OID638122756 
Producthypothetical protein 
Protein accessionYP_738133 
Protein GI114047583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.450369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAGG ATCTGAAAAT CACCCACACA CCACAACCGA AACACAAACT CACACTACCC 
ATTGCGCTTT TTAGCGGTTT AGCCTTCTTT ACCGCACAGA GTGCTTTAGC CAACACGCAA
AGCACGCCCC TAAGTTACGC TGGGCTTGAG TACTCACAAA ACGTACTCAT GCCAAACGCC
GCGGATAAAA CCGAATTAAG CCAAAGCGAC ATTGCGCAGC TTATTCAACA GAACCTTGAA
ACCCATCTCT ATACACTCCC GCCTCGGGTG CAGGGCCATT ATGGGATCCG CCTCTATCGC
CTGACGGGCG ATGAGCAATA TGCCAACGCG GCGTTAGTCG ATCTTTATGC GGTAACCGAA
GCTCAAGCGT TTTATGCCTG CCAAATGGAT AACCCTGAGT TTGTACGCCA AGCCTCACAG
AACGCCATCG ACGAACTGGG CAATGGTCCC AGAGCCAAGG CCCGTAAAAA AGCCCTCGCG
CCCTTTCCTG AGTTTTTATT TTACTCCGAT GTGCTATTGC GATTTGCCAG TCGAATCGAT
GAGTTAGGCT TTACAGGTCC TTGCCATAGT CAAATGCTCC AAACCCTCAA AAAGGCTGAC
TTACGCCAAG GTTTAACCGA TCCCGCAATG ATTAAAGCCT GGGCGGCGCA GCTGATTAAC
TATGTGTATT GGGCCAAACA ATTGGGTGTA GGAGATTATC TAGAGGACTA TAAAACAGCG
TTTACTCGGG TTTATCCTGA TTCGCAGGAT GCCACACTCA GCAAAGCACA GTTTCGCAAT
AAGCTCTACG GCATGACGCA TTTTATCTTT GCCGCCAGTG AATATTATCA GCATCGAGTG
GATGCCACTG AGTTTGCATG GATTTTGGAC TATTTTGACG CAAACATTGA GCGAATTTTA
CAGGATGCGA CCGACGATAT TATTGCCGAA GTCGGCATTA GTTTTCTGCT AGCGGGCAAG
ACAGACCATC CTGTCGTGGC TCAAACTCGG GCGTATATTG CCAACTCGTT CGACCCTGAT
AGTCAAATTA TCCCCTCACC CAAGGGCAAT CCTGACTTAG CCCTTGGTGA GCATCGTAAT
GTGCTTGCGA TAATGTTACT TAATTGGCCA GAAACCCTCT ATCCCGGTCC CTACCTTAAC
GAACTTAACG CGACGAAAAA GTATTTACCT ATGGGCGTGA CGCCTAAGGT TATCGATTAA
 
Protein sequence
MSQDLKITHT PQPKHKLTLP IALFSGLAFF TAQSALANTQ STPLSYAGLE YSQNVLMPNA 
ADKTELSQSD IAQLIQQNLE THLYTLPPRV QGHYGIRLYR LTGDEQYANA ALVDLYAVTE
AQAFYACQMD NPEFVRQASQ NAIDELGNGP RAKARKKALA PFPEFLFYSD VLLRFASRID
ELGFTGPCHS QMLQTLKKAD LRQGLTDPAM IKAWAAQLIN YVYWAKQLGV GDYLEDYKTA
FTRVYPDSQD ATLSKAQFRN KLYGMTHFIF AASEYYQHRV DATEFAWILD YFDANIERIL
QDATDDIIAE VGISFLLAGK TDHPVVAQTR AYIANSFDPD SQIIPSPKGN PDLALGEHRN
VLAIMLLNWP ETLYPGPYLN ELNATKKYLP MGVTPKVID