| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2087 |
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| Symbol | |
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| ID | 4258354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 2463544 |
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| End bp | 2465451 |
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| Gene Length | 1908 bp |
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| Protein Length | 635 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638122755 |
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| Product | hypothetical protein |
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| Protein accession | YP_738132 |
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| Protein GI | 114047582 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.489263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAT CCATTTTAAC GGCTAGCCTG TTTGGCTGGT GTTTATCCTC CCTCGGTGCA
GCCTATGCTG CGCCAAGTCC TGTGCCGCTG CTGGTTGAGC AGTGTTTGCG CCAACCCAAT
ATCGATTTGG CAGGCGCCTT CGCAAGCTAC GCTAGCACCC ACCAGCTCCA AAGCTTAACA
CTGGCGGATA AGGCACTAGT GTTAGAGCAG CAAACCATAG GGCTGAATAA TGTCAACGAC
AGACTCACCT ACTACCGAGG TTTGCCGCTG TCGGGGGATG AGCGCCAAGG TATACTGCAG
TGTCAATTGC GTTTAGCCGA CACTCTGAGC GACTTACTAA ACCAAGCAGA ATTTAGCCAA
CTGGCGTTTG AGCTGACGCA AGCAGCATCG ATAAATCATG CTGCAGCAAG TCAGGAACAG
GCCTTGCTCG GCGAGCAATT AACGGCTTTA TTGCGCCAAC ATTTATCCAT TATGGATAAA
GCCAAGCTGC ACACGGCGCA GGCCAGCATT CGCCAAGGTT TAGGCAATCA GCAGTTTCAA
CTGGATATTC AAGCGGCTAA CTGCCAGCTC ACGGCTGAAG TAGCGGAGGT TAATACAGCC
AATAACGAGG AAGAAACGGC AAATTCAGGC ACTTTCTCAG GGACTATCGC CAATTACCTG
TTAAAGCAAC CCAATGCCGA ATGTCGACAA ACTCTGTGGC AAGCTTATCA AGGTCGAGCT
AGGGAACATA ATCAAGTCGC CTTACACCGC ATTGCCGAGC TGCGCCAACG CATTGCCAAT
GACGCAGGTT TTAGCGATTA CGCCAGTTAC AGCCTCAGCG ATCAGCAACT CAATACCCCG
GAATTAGTTA AAGCCTTTCT CGATAGCCAA ACCGAAGCAA TTCAAGTTGC CCCTTGGGAT
CTTGGCCGTA CCTTATCGCA ATTACCCAGT GCGCAAACCA CCGCTCTCAA TACCCGAGAG
CTGCTCGACA ACGCCTTAAC AAGCTTAAGC GAGTTTGGTT TACGTTTTGA GGTGATTGGC
GAGCATCAAG ACTCGACAGC CACTCAAACG GCACTTTCTC AAACGGCACT CGCACAAGCG
CAGCAACAGA TCCTCCGTGT TTACCATATG GATAGATTAT TGGGAGAAGT ATATCTGGCT
ATCGGCGCTC AAGATAAAGT GAATAAATCT AGGAATGCCA GTCAACACAC CCTCAGACAA
AATGTGATTG GACAGCAATT TGGTCAACAG GCGCTTGAGC TCCCCGCGAC ACTTAATAAT
TTCAAAGATA TCGAACGCTT TACCCAAGCC CTCGCCGATG CAATGACCTC ACTGGCGCGC
GGCAGTCATT TTTACCTTAA CAACACTTTA GGCCCGACGC TCGATACCAA TCAATTACCG
AGTCTTTGGC TCGCTAAGGT ATTACGCCAA ACGCTATTCC CCCAATTTGA TACCCTATAT
ATTCAGCCGA GGGAAACGCT CGCAAGCGCC TATGCGACGC AGCTTAAAGT CTTTCGCGCT
AAGGTAGCAC TTAACTTTTA CCAGTCCTTA AACCAGCAAA GCTATCCGGA TCTCCCAGCG
GAGTTTAGCA AAAGCTTTGG GGCGAACTGG ATACAAGCGA TTGATTACCC ATACAGTTTC
AATGCTATCG CCAACGAAGG CCCACGTTAT TATCAATCCC TGTGGCAAGC CAAACTCGCA
ACGCTTGTCC ATCAATCCAC CCAAGACTGC CAAGATAAAC TTAGTCTTTT TAATCTCCTC
GTGGTCAATG AGACCGCACT CACCTTGAGC GAGCAACTGC GCGCCATACT TGGCGAACCC
GTGGATGCCG CTGCGCTTAT CCAAAGGATT ATCCATGTCT CAGGATCTGA AAATCACCCA
CACACCACAA CCGAAACACA AACTCACACT ACCCATTGCG CTTTTTAG
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| Protein sequence | MQKSILTASL FGWCLSSLGA AYAAPSPVPL LVEQCLRQPN IDLAGAFASY ASTHQLQSLT
LADKALVLEQ QTIGLNNVND RLTYYRGLPL SGDERQGILQ CQLRLADTLS DLLNQAEFSQ
LAFELTQAAS INHAAASQEQ ALLGEQLTAL LRQHLSIMDK AKLHTAQASI RQGLGNQQFQ
LDIQAANCQL TAEVAEVNTA NNEEETANSG TFSGTIANYL LKQPNAECRQ TLWQAYQGRA
REHNQVALHR IAELRQRIAN DAGFSDYASY SLSDQQLNTP ELVKAFLDSQ TEAIQVAPWD
LGRTLSQLPS AQTTALNTRE LLDNALTSLS EFGLRFEVIG EHQDSTATQT ALSQTALAQA
QQQILRVYHM DRLLGEVYLA IGAQDKVNKS RNASQHTLRQ NVIGQQFGQQ ALELPATLNN
FKDIERFTQA LADAMTSLAR GSHFYLNNTL GPTLDTNQLP SLWLAKVLRQ TLFPQFDTLY
IQPRETLASA YATQLKVFRA KVALNFYQSL NQQSYPDLPA EFSKSFGANW IQAIDYPYSF
NAIANEGPRY YQSLWQAKLA TLVHQSTQDC QDKLSLFNLL VVNETALTLS EQLRAILGEP
VDAAALIQRI IHVSGSENHP HTTTETQTHT THCAF
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