| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2080 |
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| Symbol | aspS |
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| ID | 4257245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2453353 |
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| End bp | 2455128 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638122748 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_738125 |
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| Protein GI | 114047575 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0108911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00210714 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAGTC ATTATTGTGG AGACGTCAAT AAGTCTCACG TTGGACAAGA AGTTACCTTG
GTAGGTTGGG TTAATCGTAG CCGTGATTTG GGTGGCGTGG TCTTTTTAGA TTTAAGAGAC
AGAGAAGGTC TGGTCCAAGT GGTTTACGAT CCAGATTTAC CTGAGGTATT CAATGTGGCG
AGTACACTGC GCGCCGAGTT TTGTGTGCAG GTAAAAGGTG TGGTTCGTGC CCGTCCTGAT
AGCCAAGTTA ACGCGCAAAT GAAGACCGGC GAAATTGAAG TATTAGGTAA AGAACTGACG
ATTATCAATA GTTCTGAGCC GCTGCCGCTG AGCTTAGATA ACTATCAAAA CAACAGTGAA
GAGCAGCGTC TAAAGTACCG TTATTTAGAT TTACGTCGCC CTGAAATGGC GCAGCGTTTA
ATGTTCCGCG CGAAAGTGAC CAGTGCTGTG CGTCGTTTCC TCGACTCAAA CGGCTTCTTA
GATATTGAGA CACCTATCCT GACCAAGGCA ACGCCAGAAG GTGCCCGCGA TTATTTAGTG
CCAAGCCGCA CTTATAAAGG TCAGTTCTTT GCCTTGCCAC AGTCGCCACA ACTGTTTAAA
CAGTTGCTGA TGATGTCAGG CTTTGACCGT TATTATCAAA TCGTAAAATG CTTCCGTGAC
GAAGACCTAC GTGCTGATCG TCAGCCAGAA TTCACTCAAA TCGATATCGA AACCTCATTT
ATGACGTCTG AGCAAGTAAT GGCTAAGACC GAAGAAATGA TGCGTGGCCT GTTCCTTGAG
ATGCTGAACG TCGATTTAGG CGAATTCCCA CGTATGACCT ATAACGAAGC CATGCGTCGT
TTCGGTTCAG ACAAGCCCGA TTTACGTAAC CCATTAGAAC TGGTTGACGT TGCAGATTTA
CTCAAAAACG TTGAGTTTGC GGTATTCTCA GGCCCTGCCA ATGACGAAGA AGGCCGTGTT
GCGGCTCTGC GTATTCCTGG TGGCGCGAGC TTATCCCGTA AACAAATCGA TGATTACACT
AAGTTCGTCG GTATCTACGG TGCTAAAGGT TTAGCGTGGA TGAAGCTAAA CGACCTGACT
CAAGGGTTAG AAGGCATTCA ATCACCTGTG CTGAAGTTCT TGAACGAAGG CATTGTAAAC
GAAATCATCA GCCGCACTGG CGCACAAACT GGCGATATCA TCCTGTTTGG TGCCGATAAC
GCGATTGTGG TTGCTGAATC TATGGGTGCA CTGCGTCTTA AAGCCGGTGA AGACTTTAAC
CTGCTCGAAG GTCAATGGCG TCCTCTGTGG GTGGTTGACT TCCCAATGTT TGAGAAGATC
AACGGCAGCT TCCACGCGGT TCACCATCCG TTTACTGCGC CACGCGGTGT GACACCACAA
GAGCTGGAAG CCAATCCGGC TAACCGTGTG TCAGATGCCT ACGACATGGT ATTAAACGGC
TGTGAATTAG GGGGTGGTTC AGTACGTATC CACAACCAAG AGATGCAATC TGCGGTATTC
CGTATTCTTG GCATTACCGA TGAAGAAGCG AAAGAGAAAT TCGGCTTCTT ACTCGAAGCG
CTGCGCTACG GTACGCCACC ACATGCGGGT CTGGCATTCG GTTTAGACCG TATTATCATG
CTGATGACGG GCGCAAGCTC TATCCGTGAT GTGATGGCTT TCCCGAAAAC CACCACAGCG
GCCTGTCCGT TAACCAATGC CCCAGGTTTT GCTAACCCAC AACAATTAGC TGAACTAGGC
ATTTCCGTGG TGAAAGCCGC GAAGACCGAA GACTAA
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| Protein sequence | MRSHYCGDVN KSHVGQEVTL VGWVNRSRDL GGVVFLDLRD REGLVQVVYD PDLPEVFNVA
STLRAEFCVQ VKGVVRARPD SQVNAQMKTG EIEVLGKELT IINSSEPLPL SLDNYQNNSE
EQRLKYRYLD LRRPEMAQRL MFRAKVTSAV RRFLDSNGFL DIETPILTKA TPEGARDYLV
PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF
MTSEQVMAKT EEMMRGLFLE MLNVDLGEFP RMTYNEAMRR FGSDKPDLRN PLELVDVADL
LKNVEFAVFS GPANDEEGRV AALRIPGGAS LSRKQIDDYT KFVGIYGAKG LAWMKLNDLT
QGLEGIQSPV LKFLNEGIVN EIISRTGAQT GDIILFGADN AIVVAESMGA LRLKAGEDFN
LLEGQWRPLW VVDFPMFEKI NGSFHAVHHP FTAPRGVTPQ ELEANPANRV SDAYDMVLNG
CELGGGSVRI HNQEMQSAVF RILGITDEEA KEKFGFLLEA LRYGTPPHAG LAFGLDRIIM
LMTGASSIRD VMAFPKTTTA ACPLTNAPGF ANPQQLAELG ISVVKAAKTE D
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