| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2050 |
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| Symbol | |
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| ID | 4255921 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2417689 |
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| End bp | 2418384 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638122718 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_738095 |
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| Protein GI | 114047545 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00216639 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000326951 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACCA AACCTATCCT CGTAGCGCTT GATTACGATA ATAAAAACCA CGCCTTACAA
CTGATAGATC AACTCGATCC CAACATGTGC CGCCTCAAAG TGGGCAAAGA AATGTTTACC
CTGTTTGGCC CCCAATTGGT TGAAGATATT CACGACCGTG GTTTCGAGCT TTTCCTCGAC
TTAAAGTTTC ACGATATTCC TAATACGGTC GCCAAAGCGG TCGCGGCTGC GGCAGAACTG
GGCGTGTGGA TGACAAACGT CCATGCCAGC GGTGGCTTGG CCATGATGGA AGCGGCGAAA
AAAGCATTGC TGCCCTATGG TAATGATGCA CCTATGCTAA TCGCAGTAAC TGTCCTTACT
TCAATGAGTG ATAAAGATTT AAAACTCATC GGCATTGATG TTCCAGCCTT TGAGCATGTG
CAACGTCTCG CGAAACTCAC CAAACAGGCG GGCCTTGATG GTGTTGTCTG TTCGGCGCAA
GAGGCAAGCG CACTTAAATC ACTCTTAGGT CAAGATTTTA AACTTATCAC CCCGGGGATC
CGCCCTGTGG GCAGCGACGT GGGCGACCAA CACCGGGTGA TGACGCCATC GCAGGCGCTT
GCAGCCGGTT CTGATTATTT AGTGATTGGT CGACCAATCA CTAAGGCCGC CGACCCTCTG
GCTGCACTGC AGGCGATTCA TCAATCTCTA GCTTGA
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| Protein sequence | MTTKPILVAL DYDNKNHALQ LIDQLDPNMC RLKVGKEMFT LFGPQLVEDI HDRGFELFLD
LKFHDIPNTV AKAVAAAAEL GVWMTNVHAS GGLAMMEAAK KALLPYGNDA PMLIAVTVLT
SMSDKDLKLI GIDVPAFEHV QRLAKLTKQA GLDGVVCSAQ EASALKSLLG QDFKLITPGI
RPVGSDVGDQ HRVMTPSQAL AAGSDYLVIG RPITKAADPL AALQAIHQSL A
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