| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_2024 |
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| Symbol | |
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| ID | 4258624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2385000 |
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| End bp | 2385620 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638122691 |
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| Product | riboflavin synthase subunit alpha |
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| Protein accession | YP_738070 |
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| Protein GI | 114047520 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0307] Riboflavin synthase alpha chain |
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| TIGRFAM ID | [TIGR00187] riboflavin synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0115302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.138776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTACTG GTATAGTTCA AGCCACCTGT GAGGTGGTTG CAATACATAA GAAAGATGGC
CTAAATACCC TTGAGGTAGC GTTTAAACCT GATTTGCATG AGGGACTTGC GATTGGTGCA
AGTGTGGCAA ATAACGGGGT ATGTCTGACG GTGACTCAGG TCATTGATGA TAGGGTATTT
TTCGATGTAG TGGAAGAGAC CTTAAGGTTG ACAAACCTTG CCAATTTGAC CGTTGGCCAG
CGGGTGAACA TTGAGCGTTC TTTGACATTC GGCAGTGAAA TTGGCGGCCA TATCCTCTCG
GGACACATTC ATACTAAGGC GAAAGTGAGC CACATTAGTC ACACCGAGCA GCATTATGAT
CTGACCTTAA GCGTTGAGCC CAAATGGATG AACTATATTC TTTATAAAGG CTTTGTCGGG
GTAAACGGTT GCAGCTTAAC GGTAGGCGAG GTGACCGAAA GCAGTTTTAT GCTGCACTTG
ATCCCAGAAA CCCTCAAATT AACCAATTTA GGGCAGTGTC AGGTTGGGGA TGAGTTAAAT
ATCGAAATTG ATAGCCAAAC CCAAGCCATC GTCGACACCG TCGAGCGCGT GCTGGCCAAA
CGTTTTAGCG GCCAATCTTA A
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| Protein sequence | MFTGIVQATC EVVAIHKKDG LNTLEVAFKP DLHEGLAIGA SVANNGVCLT VTQVIDDRVF
FDVVEETLRL TNLANLTVGQ RVNIERSLTF GSEIGGHILS GHIHTKAKVS HISHTEQHYD
LTLSVEPKWM NYILYKGFVG VNGCSLTVGE VTESSFMLHL IPETLKLTNL GQCQVGDELN
IEIDSQTQAI VDTVERVLAK RFSGQS
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