Gene Shewmr7_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1998 
Symbol 
ID4258684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2363377 
End bp2363907 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content47% 
IMG OID638122664 
Producthypothetical protein 
Protein accessionYP_738044 
Protein GI114047494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0693742 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000181404 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
GTGATACAAC AAATTACCCC TGCACCACGC GCCTTAACCG AAGTTAAAAT CCTCGCTAAA 
AAGCACCTTA AAGCCTGCCA AACTGGCGAT GCCGTGGCGC TAGATAAACT CGCTTCCTTG
ATGAATAAGC AAGGTTTAAC GCAGCAGGAT ATCCAGCTTA AGCATTGCCA AAGCCTATTG
GCTCGTGAGC TCGGTTTTAC TGATTTTAAT CACTGTCAAA GAGTGTTATC GGGTCAAGCA
CAAATCGGTG AAGACCTAGG TACCCTCTTC CATAGCAGGC GCTGCGATAG CTTGCTCAAT
CACTGGTTCA GCGGTTTTGA TGAGGCGCAG GCTTTTTTAA AGCAATCACC ACAAATGGTG
TTGTTGCCCT ACAAAAAGCA GTTCTTTGTG GTCAACGGCC CTGACTATCT TGACGCTCTG
GGGCTTAAAT TGAGTGACAC CGCCAGCATC GACTGTATAT GGGTGGGGAG TGAAGCGGTT
GCTGCTTATG AAGCTTTTGC GCTCAGTCTT ATCAGGTATA AGCTCTCTTA G
 
Protein sequence
MIQQITPAPR ALTEVKILAK KHLKACQTGD AVALDKLASL MNKQGLTQQD IQLKHCQSLL 
ARELGFTDFN HCQRVLSGQA QIGEDLGTLF HSRRCDSLLN HWFSGFDEAQ AFLKQSPQMV
LLPYKKQFFV VNGPDYLDAL GLKLSDTASI DCIWVGSEAV AAYEAFALSL IRYKLS