Gene Shewmr7_1866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1866 
Symbol 
ID4256721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2199510 
End bp2200157 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content50% 
IMG OID638122521 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_737912 
Protein GI114047362 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.139445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAACA TCACGGCGTT AAGAGTTACG CCAAAACAGC TGCTCTGGGT AAAATTAGTC 
TTTCATTTGA TTGGGCTTAT CCCGATTGCT TGGTTGGTTT TTACTGTGCT GTCGGGCCGT
GCTGGCGGCG ATCCTGTGCA GCATATTATC CACTTTACGG GCATTGGCGC TTTAAATGCG
TTGGCGGCTA CGCTGCTGAT TTCTCCCCTT GCTAAGGGAT TAAAGTTAGG CTGGTTGATG
CAGACGCGCC GCTTGGTTGG CTTGTATGTG TTTGCCTATG CGACTTTGCA TATTGTGGCG
TTTTTTAGTT TAGATCTGCT GTTTGCCTGG GAGTTATTCT TTAGCGAGGT AGCGAAACGG
CCTTATATTT TAGTAGGCGC TCTGGCCTAT GTGATAGTCA CCGCGCTAGC GCTGACGTCC
TTTAAAGCCT TAATGCGTAA AATGGGCCGC CGTTGGCAAA CGCTGCACAA TGGCGTGTAT
TTGGTGGCGC TACTTGCGCC CATTCATTTT TATTGGTCGG TAAAATCCGA AATTATCGAA
CCGAGTCTGT ATATCCTCGG CTTTGGTTTG TTGCTCGCGT GGCGTTTACC CATTTGGCAG
AAGAAGCGCA GCAGCCGTAT CGCGATGGCC GCCGAGGGCA AGCGATAA
 
Protein sequence
MFNITALRVT PKQLLWVKLV FHLIGLIPIA WLVFTVLSGR AGGDPVQHII HFTGIGALNA 
LAATLLISPL AKGLKLGWLM QTRRLVGLYV FAYATLHIVA FFSLDLLFAW ELFFSEVAKR
PYILVGALAY VIVTALALTS FKALMRKMGR RWQTLHNGVY LVALLAPIHF YWSVKSEIIE
PSLYILGFGL LLAWRLPIWQ KKRSSRIAMA AEGKR