Gene Shewmr7_1855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1855 
Symbol 
ID4256712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2185072 
End bp2186157 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content52% 
IMG OID638122512 
Producthypothetical protein 
Protein accessionYP_737903 
Protein GI114047353 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.270651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAG TATTGACGGC TTTCTGGCAA CGCTGGTTGG CAAGACGCAT GCCGCCCAGT 
TCAGAGTTTG TCCTCAGCCA TCGCAGCATC TTTATTCTGC CCAGTGGCTT TGGGTTAGTC
TGGCTTGGGC TGGTACTGCT GCTGTATCTG TTTGGCACTA ACTATCAAAA CAATCTTGTA
ATTGGCCTGA GCATTTTGCT ACTCAGTCTA TTTAATACCT GCATCCTTTA CAGTTATAAA
AATCTCGCGG GTTTGCGCCT TCGCGCGCTC ACAGCGCCGG AGGTGTATGC GGGCGAAACC
ATCACCTTTC CAGTCCTGCT CACCTCAAAC CACAGCAGCC ACAATATCAG CCTAAATTAC
CCCAATAATT TAGCGTACTT ACTCAAACAG GTTGGCGCCG ATGAGGTGCA AGCTCTGGTC
TCGTTTGCCC ATGACAGCCG TGGTCTGGTA TCGCCTGGCC GACTTAAGAT TGAATCCTTT
TATCCCTTAG GGCTTTGCCG CGCTTGGTCC CATATTGATC TCGATAATGC GCACATCGTC
TACGCCCACC CGATTGAAAG CCCTTTACAG CTAAAGGCGG CGACCGAATC CGGTGAAGAC
GAACGGTTAG AACGAGCCGG AAAATACATC GCCGGCATCG ATGAATACAA AGGGCTTAAG
CCCCATGTAC TCGGTGAATC CCTCAAACAA GTGGCATGGA AACAATGGGC CCAAGGGCGT
GGCATGCTAA CCAAGGAGTT CGAGCAGCCT CAAGGCGATC CCGTATGGTT AACCTTAGTC
CCCGATCCCG CGCAGCTTGA ACAGCAATTA GGTCAGCTCA GCTGGCAAGT CAACCATTTG
AGTCAGCAGG AGCAATATTT TGGTCTGTGG CTGCAACGTG TTGGGGCGGA AGATCTGATC
CTTACACCCG ATACGGGCAA TGCCCATCGT ATCGCCTGCC AAAGGGCGCT CGCACTCTAC
GGGCAAGATA TCAGCACGCT GGATAAAACC GATAAATTGA TGAATAACCA AGGTGTTAAG
CATCAACATC CGCTTCCTCC CCATGGGCAA GGCGTGCGTT CTGCAACAAT GGAGCCGCGG
CGATGA
 
Protein sequence
MKRVLTAFWQ RWLARRMPPS SEFVLSHRSI FILPSGFGLV WLGLVLLLYL FGTNYQNNLV 
IGLSILLLSL FNTCILYSYK NLAGLRLRAL TAPEVYAGET ITFPVLLTSN HSSHNISLNY
PNNLAYLLKQ VGADEVQALV SFAHDSRGLV SPGRLKIESF YPLGLCRAWS HIDLDNAHIV
YAHPIESPLQ LKAATESGED ERLERAGKYI AGIDEYKGLK PHVLGESLKQ VAWKQWAQGR
GMLTKEFEQP QGDPVWLTLV PDPAQLEQQL GQLSWQVNHL SQQEQYFGLW LQRVGAEDLI
LTPDTGNAHR IACQRALALY GQDISTLDKT DKLMNNQGVK HQHPLPPHGQ GVRSATMEPR
R