Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1855 |
Symbol | |
ID | 4256712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2185072 |
End bp | 2186157 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638122512 |
Product | hypothetical protein |
Protein accession | YP_737903 |
Protein GI | 114047353 |
COG category | [R] General function prediction only |
COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.270651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAG TATTGACGGC TTTCTGGCAA CGCTGGTTGG CAAGACGCAT GCCGCCCAGT TCAGAGTTTG TCCTCAGCCA TCGCAGCATC TTTATTCTGC CCAGTGGCTT TGGGTTAGTC TGGCTTGGGC TGGTACTGCT GCTGTATCTG TTTGGCACTA ACTATCAAAA CAATCTTGTA ATTGGCCTGA GCATTTTGCT ACTCAGTCTA TTTAATACCT GCATCCTTTA CAGTTATAAA AATCTCGCGG GTTTGCGCCT TCGCGCGCTC ACAGCGCCGG AGGTGTATGC GGGCGAAACC ATCACCTTTC CAGTCCTGCT CACCTCAAAC CACAGCAGCC ACAATATCAG CCTAAATTAC CCCAATAATT TAGCGTACTT ACTCAAACAG GTTGGCGCCG ATGAGGTGCA AGCTCTGGTC TCGTTTGCCC ATGACAGCCG TGGTCTGGTA TCGCCTGGCC GACTTAAGAT TGAATCCTTT TATCCCTTAG GGCTTTGCCG CGCTTGGTCC CATATTGATC TCGATAATGC GCACATCGTC TACGCCCACC CGATTGAAAG CCCTTTACAG CTAAAGGCGG CGACCGAATC CGGTGAAGAC GAACGGTTAG AACGAGCCGG AAAATACATC GCCGGCATCG ATGAATACAA AGGGCTTAAG CCCCATGTAC TCGGTGAATC CCTCAAACAA GTGGCATGGA AACAATGGGC CCAAGGGCGT GGCATGCTAA CCAAGGAGTT CGAGCAGCCT CAAGGCGATC CCGTATGGTT AACCTTAGTC CCCGATCCCG CGCAGCTTGA ACAGCAATTA GGTCAGCTCA GCTGGCAAGT CAACCATTTG AGTCAGCAGG AGCAATATTT TGGTCTGTGG CTGCAACGTG TTGGGGCGGA AGATCTGATC CTTACACCCG ATACGGGCAA TGCCCATCGT ATCGCCTGCC AAAGGGCGCT CGCACTCTAC GGGCAAGATA TCAGCACGCT GGATAAAACC GATAAATTGA TGAATAACCA AGGTGTTAAG CATCAACATC CGCTTCCTCC CCATGGGCAA GGCGTGCGTT CTGCAACAAT GGAGCCGCGG CGATGA
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Protein sequence | MKRVLTAFWQ RWLARRMPPS SEFVLSHRSI FILPSGFGLV WLGLVLLLYL FGTNYQNNLV IGLSILLLSL FNTCILYSYK NLAGLRLRAL TAPEVYAGET ITFPVLLTSN HSSHNISLNY PNNLAYLLKQ VGADEVQALV SFAHDSRGLV SPGRLKIESF YPLGLCRAWS HIDLDNAHIV YAHPIESPLQ LKAATESGED ERLERAGKYI AGIDEYKGLK PHVLGESLKQ VAWKQWAQGR GMLTKEFEQP QGDPVWLTLV PDPAQLEQQL GQLSWQVNHL SQQEQYFGLW LQRVGAEDLI LTPDTGNAHR IACQRALALY GQDISTLDKT DKLMNNQGVK HQHPLPPHGQ GVRSATMEPR R
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