Gene Shewmr7_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1843 
Symbol 
ID4257257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2166539 
End bp2166796 
Gene Length258 bp 
Protein Length85 aa 
Translation table11 
GC content47% 
IMG OID638122501 
ProductHPr family phosphocarrier protein 
Protein accessionYP_737892 
Protein GI114047342 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGAAA AATCTGTCAC TATCACCGCA AAACATGGTA TTCATACCCG CCCTGCCGCC 
CTGTTAGTGA AAGAAGCGAA AACTTTCAAC TGCGATGTAT TAGTTGAATG CAATGGCAAG
CAGGCCAGCG CCAAAAGCTT ATTTAAATTG CAAACATTAG GTCTGTATCA TGGGGTGACC
GTGAGGGTGT TTGCCGAGGG TGAGCAGGCG CAGGAAGCGG TTGAGAAAGT CTCGGAACTG
CTCATTACCT TAAGTTAA
 
Protein sequence
MYEKSVTITA KHGIHTRPAA LLVKEAKTFN CDVLVECNGK QASAKSLFKL QTLGLYHGVT 
VRVFAEGEQA QEAVEKVSEL LITLS