| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1833 |
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| Symbol | |
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| ID | 4255217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 2156546 |
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| End bp | 2157904 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638122491 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_737882 |
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| Protein GI | 114047332 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.218388 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTACAA TTTGGACGCC AGATCTAGAG GCATTTACAG GTCCTAAATA TCAACGCCTG
GTCAGTGCGA TCGAGCAAGG CATTTTGCTA AAAGCCCTTC CCCATGGCAC GAAACTCCCG
CCACAGCGGC GTTTAGCCGA TGCACTTGGG GTGACCATAG GCACTGTCAC TCGGGCCTAT
GCTCTAGCGG AGCAACGCGG TTATGTGGAA GCGCGTATCG GTGATGGTAC TTATGTCAAC
GCCTCTCCCG TACCTGAGTT CAGTCATTTG CAGCTCAATA TGGCGACTTG TCAGCAGCCG
CTGACGGATC AAATAAGTAC GCTGAGTGAT TGCCTAAGCC AACTGGCGAA GGACCCAGCC
AAGCTGAGTC AACTCCTTGG CTATCGCGCC AGCCCCTTAG ACCAGCATCA ACAAATATTT
CACCACTGGC TTGCGCAACG CGGCATTGAG CAGCGACCTG AGCAATTGAT CTTTACCCAT
GGTGGGCAAC AGGCCATTTT TGCCTGTCTC AATGCCTTTC TCACCAAGGG CGAGGTGCTC
CTGCACGAGC AATACAGCTA CCCCGGTGTG CGTATTTGCG CTAAACAATT GGGTATCAAT
AGCATTGGCG TGCCGTTAAC CTCTGACGGG GTCGATCTCG CAAGATTAGA GGCCTTAGTG
CAAATCCATC AACCTAAGCT GGTGTATTTA ACCCTCAACA ATCAAAACCC CACCTGCGTT
CAATACAGTG AGCAACAGAG AGAAAAACTG TTGGCACTCG CGGAGCAGTA CCAGTTTTAT
ATCATTGAAG ATGATGTGAA TTATTGTCTC CCTGAAGAGT GGCACCCTCC GCTGTGGCAG
TTAGCGCAGA CGCTGAATGT GCCGAGGGTC ATTTACATTT CAAGCCTTTC TAAGCTGTTT
TCAGGGGGCT TAAGGCAAGG TTTTATCCTA GTGCCCGAGC CGCTCATCGC TCCATTGCGC
CTCGCCATTC ATAGTCAATG TTGGATGGTT TCGCCGCTCA ATGTGGAGCT CGCTTGTCAG
CTAATCAAGC GCGGGCACAT CACGGCCAAT CGCGATGCGA TTATTCGCGA GCGTCAGCAG
CAATGCATAG CATTAGGTGA CAAGCTGGGG TTAACCCAAC GCTGGCGGGG TTTAAATGGC
TGGATCCAGT TACCCGAAGA CATTAAAGCC CATCATCTGG TGACCGCCTT AGCGGCAAAA
GGCGTGCTGA TCCGTAATGG GGATGACTTT AACTGCCATG ACAACTTTAT CCGTTTAAGT
TTAGGTGGCG CCGAAAACGA TACCCAATTC CAGCTTGCGC TCGACTGCAT CGAATCCACC
TTTAACGCCC TCAAGCAACA TGCCTATTCG GTCGTTTAG
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| Protein sequence | MGTIWTPDLE AFTGPKYQRL VSAIEQGILL KALPHGTKLP PQRRLADALG VTIGTVTRAY
ALAEQRGYVE ARIGDGTYVN ASPVPEFSHL QLNMATCQQP LTDQISTLSD CLSQLAKDPA
KLSQLLGYRA SPLDQHQQIF HHWLAQRGIE QRPEQLIFTH GGQQAIFACL NAFLTKGEVL
LHEQYSYPGV RICAKQLGIN SIGVPLTSDG VDLARLEALV QIHQPKLVYL TLNNQNPTCV
QYSEQQREKL LALAEQYQFY IIEDDVNYCL PEEWHPPLWQ LAQTLNVPRV IYISSLSKLF
SGGLRQGFIL VPEPLIAPLR LAIHSQCWMV SPLNVELACQ LIKRGHITAN RDAIIRERQQ
QCIALGDKLG LTQRWRGLNG WIQLPEDIKA HHLVTALAAK GVLIRNGDDF NCHDNFIRLS
LGGAENDTQF QLALDCIEST FNALKQHAYS VV
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