Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1702 |
Symbol | |
ID | 4255261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 2004505 |
End bp | 2007561 |
Gene Length | 3057 bp |
Protein Length | 1018 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638122360 |
Product | acriflavin resistance protein |
Protein accession | YP_737752 |
Protein GI | 114047202 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTCA CCCGTTTAGC GATAAAACGC CCAGTCACCA CCAGCATGTT TTTCTTTGCT ATCTTGCTGT TTGGTCTGGC TTCTAGCCGC CTACTGCCGC TCGAAATGTT CCCTGGTATC GATATTCCGC AAATCGTGGT GCAAGTGCCT TACAAAGGCT CAACCCCTGC GGAAGTCGAG CGCGATATTA CTAAGGTGCT CGAAGAGTCC CTCGCCACTA TGGGCGGGAT TGATGAGCTC GAATCTGAGT CTTCCCAAGA AGGCGCTGAA ATCGAAATCA ATATGAAATG GGGTGAAAAC GTTGCGACTA AAAGCTTAGA AGCGCGGGAA AAAATCGATG CGGTGCGACA CTTATTGCCC AAGGATGTTG AGCGGGTGTT TATCCGCCAA TTCTCCACCG CTGATATGCC GGTATTGACC ATACGGATTT CGAGCGACCG CGAGCTTTCT GGCGCATTCG ACTTGCTTGA TAAGCAGCTT AAGCGCCCGC TGGAGCGGGT CGAAGGGGTG TCTAAAGTCA ATCTCTATGG GGTTGAGCAA AAGCAGATTG AGGTCAGGAT CAATGCCAAC CGCCTCGCCG CCAGTGGCTA TTCGGCAACC GAGTTACAGA CACGTCTCGG CCGCGAAAAC TTTGTGCTCA GCGCTGGCAC CTTAAGGGAA AGTAATCTGG TTTATCAGGT GTCTCCTAAG GGCGAATTTC GTAATTTAGA GGACATTAAA GCCCTAGTAT TATTACCAGG GCTGACCTTA GATGACGTTG CCGATGTGCA ATTTGCGCTG CCGGAACGGG TCGAAGGTCG TCACTTAGAT AAGCATTACG CCGTGGGTCT GGATGTGTTT AAAGAATCCG GCGCCAACTT AGTGGAAGTA TCTGATCGGG TATTAGAAGT GATTGAGCTT GCCAAGCAAG ATCAACAATT CCAAGGTATC CGCTTGTTTA TCATGGAAGA TCAAGCCTCT GGCGTAAAAT CTTCCCTCTC GGATCTGCTG CTGTCGGGAT TAATCGGTGC CTTGCTGTCT TTTATCGTGC TGTATTTATT CCTGAGAAAC TTCAAGATGA CCTTGATTGT GGTGTCATCA GTGCCGATTT CGATTGGAAT GACGCTGGCC GCCATGTACT TGCTGGGTTA CAGCTTAAAC ATTCTGTCAA TGATGGGGCT GTTATTGGCG GTCGGTATGC TTATTGATAA CGCTGTAGTG GTCACCGAGA GTGTACTGCA GGAGAAGCAA GGCAAAGCCA CCAATAGCGC AGAGGATAAT GAAAACGCGG TCATGACAGG GGTCGATAAG GTTAGTCTTG CCGTACTTGC GGGCACTATG ACCACGGCTA TCGTTTTTTT ACCCAATATC TTCGGGGTAA AAGTCGAGCT CACCATCTTC CTAGAGCATG TGGCGATTGC GATTTGTATT TCGCTGGCGG CCTCATTATT AGTGGCTAAA ACATTAATTC CATTGATGTT GACTAAGTTT CACTTCGATA TCGCGCCAGA GAAAGCACCC GGTAAGTTGC AAAACTTCTA CAATCGTAGT CTCAATTGGG TACTGCTGCG CCCTTGGCGT TCAGGGCTAA TTTCGGTGGC CATTTTGGTC TCCACCGCCC TGCCGCTGTC TATGGTCAAA CAGGATCAGG AGGACAGCCA AAGCAAGGAG CGGATTTACA TCAACTACCA AGTAGAAGGT CGCCATAATC TCAATGTGAC CGAAGCAATG GTGAGCCAAA TGGAAGAGTA TCTTTATAAT AATAAAGAGG AATTTCATAT CGACTCAGTG TATAGCTACT ATGCGCCTGA CGACGCCTCT TCGGTGATTT TGCTGAAAAA AGACCTACCT ATGCCACTGG ATGAGTTAAA GAAGAAAATC CGCAGCGGTT TTCCTAAATT CTCCATCGCG AAACCTCAAT TTGGCTGGGG TAATGATAAC TCGGGCGTAC GTGTCACGCT CACAGGTCGC TCCACCTCAG AGCTTATCCA TTTGAGTGAG CAAGTATTAC CCCTGCTCTC CAATATCAAA GGCTTAGTGG ATGTGCGCTC CGAAGTGAAC GGCGCGCAGC AGGAAGTGGT GATCCGCATT AATCGGCAGA TGGCGGCACG ACTGGATTTA AAACTCAACG AAGTGGCCTC TAGCATCTCC ATGGCCCTGC GCGGCTCACC GCTGCGCTCA TTTAGGCATG ATCCCAATGG GGAACTGCGT ATCGAAATGG CCTATGAGAA GGAATGGCAA AAATCCCTCG AGAAGCTAAA GCAACTGCCC ATCGTACGTA TCGACCAACG CCTGTATACC CTTGATAACC TTGCCAGTAT CGAGATTTTA CCTAGGTTCG ATACCATCAA GCACTACAAT CGCCAAACCT CGCTTTCTAT CGGCGCGAAC TTAGACAAGC TCACCACAGA GGAAGCCCAA ACTAAGATCA AACAGGTGAT GGAAAACGTG CGCTTCCCGA ATGGTTATAA CTATTCGCTG CGCGGTGGGT TTGAGCGTCA GGATGAAGAT GAGAGCGTCA TGGCTATCAA TATGCTGCTT GCTATCGCCA TGATTTACAT CGTAATGGCG GCGCTGTTTG AATCTTTATT ATTACCGACG GCGATTATCA CCTCGATTCT GTTCTCAATC ACTGGCGTCT TTTGGGCATT GCTGCTCACA GGCACGCCTA TGTCAGTCAT GGCCATGATA GGGATCTTGA TCCTAATGGG AATTGTGGTG AATAACGGCA TCGTATTGGT CGACCAAATC AACCAAATGA CGCCTGAACT CGATAAGCTG TCAGATACCA TACGTGAAGT CTGTATTACC CGTCTGCGCC CTGTGCTAAT GACGGTGGGA ACAACCGTGC TGGGTCTTGT GCCACTGGCG ATGGGCGAAA CCCAAATCGG CGGCGGTGGT CCACCCTACT CACCAATGGC CATCGCCATT ATCGGCGGTT TGTCGTTCTC AACGGTGACG AGTCTGTATT TGGTTCCCTT GTGCTATCAA CTGCTCTACA GAATGCGTTA TCGCGCCGCA GTGCACCTAG GTGAATCAAA CCGCATCGCC CAAAAACTCC TCCCTTGGAC GGTATAG
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Protein sequence | MNLTRLAIKR PVTTSMFFFA ILLFGLASSR LLPLEMFPGI DIPQIVVQVP YKGSTPAEVE RDITKVLEES LATMGGIDEL ESESSQEGAE IEINMKWGEN VATKSLEARE KIDAVRHLLP KDVERVFIRQ FSTADMPVLT IRISSDRELS GAFDLLDKQL KRPLERVEGV SKVNLYGVEQ KQIEVRINAN RLAASGYSAT ELQTRLGREN FVLSAGTLRE SNLVYQVSPK GEFRNLEDIK ALVLLPGLTL DDVADVQFAL PERVEGRHLD KHYAVGLDVF KESGANLVEV SDRVLEVIEL AKQDQQFQGI RLFIMEDQAS GVKSSLSDLL LSGLIGALLS FIVLYLFLRN FKMTLIVVSS VPISIGMTLA AMYLLGYSLN ILSMMGLLLA VGMLIDNAVV VTESVLQEKQ GKATNSAEDN ENAVMTGVDK VSLAVLAGTM TTAIVFLPNI FGVKVELTIF LEHVAIAICI SLAASLLVAK TLIPLMLTKF HFDIAPEKAP GKLQNFYNRS LNWVLLRPWR SGLISVAILV STALPLSMVK QDQEDSQSKE RIYINYQVEG RHNLNVTEAM VSQMEEYLYN NKEEFHIDSV YSYYAPDDAS SVILLKKDLP MPLDELKKKI RSGFPKFSIA KPQFGWGNDN SGVRVTLTGR STSELIHLSE QVLPLLSNIK GLVDVRSEVN GAQQEVVIRI NRQMAARLDL KLNEVASSIS MALRGSPLRS FRHDPNGELR IEMAYEKEWQ KSLEKLKQLP IVRIDQRLYT LDNLASIEIL PRFDTIKHYN RQTSLSIGAN LDKLTTEEAQ TKIKQVMENV RFPNGYNYSL RGGFERQDED ESVMAINMLL AIAMIYIVMA ALFESLLLPT AIITSILFSI TGVFWALLLT GTPMSVMAMI GILILMGIVV NNGIVLVDQI NQMTPELDKL SDTIREVCIT RLRPVLMTVG TTVLGLVPLA MGETQIGGGG PPYSPMAIAI IGGLSFSTVT SLYLVPLCYQ LLYRMRYRAA VHLGESNRIA QKLLPWTV
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