Gene Shewmr7_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1702 
Symbol 
ID4255261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp2004505 
End bp2007561 
Gene Length3057 bp 
Protein Length1018 aa 
Translation table11 
GC content49% 
IMG OID638122360 
Productacriflavin resistance protein 
Protein accessionYP_737752 
Protein GI114047202 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTCA CCCGTTTAGC GATAAAACGC CCAGTCACCA CCAGCATGTT TTTCTTTGCT 
ATCTTGCTGT TTGGTCTGGC TTCTAGCCGC CTACTGCCGC TCGAAATGTT CCCTGGTATC
GATATTCCGC AAATCGTGGT GCAAGTGCCT TACAAAGGCT CAACCCCTGC GGAAGTCGAG
CGCGATATTA CTAAGGTGCT CGAAGAGTCC CTCGCCACTA TGGGCGGGAT TGATGAGCTC
GAATCTGAGT CTTCCCAAGA AGGCGCTGAA ATCGAAATCA ATATGAAATG GGGTGAAAAC
GTTGCGACTA AAAGCTTAGA AGCGCGGGAA AAAATCGATG CGGTGCGACA CTTATTGCCC
AAGGATGTTG AGCGGGTGTT TATCCGCCAA TTCTCCACCG CTGATATGCC GGTATTGACC
ATACGGATTT CGAGCGACCG CGAGCTTTCT GGCGCATTCG ACTTGCTTGA TAAGCAGCTT
AAGCGCCCGC TGGAGCGGGT CGAAGGGGTG TCTAAAGTCA ATCTCTATGG GGTTGAGCAA
AAGCAGATTG AGGTCAGGAT CAATGCCAAC CGCCTCGCCG CCAGTGGCTA TTCGGCAACC
GAGTTACAGA CACGTCTCGG CCGCGAAAAC TTTGTGCTCA GCGCTGGCAC CTTAAGGGAA
AGTAATCTGG TTTATCAGGT GTCTCCTAAG GGCGAATTTC GTAATTTAGA GGACATTAAA
GCCCTAGTAT TATTACCAGG GCTGACCTTA GATGACGTTG CCGATGTGCA ATTTGCGCTG
CCGGAACGGG TCGAAGGTCG TCACTTAGAT AAGCATTACG CCGTGGGTCT GGATGTGTTT
AAAGAATCCG GCGCCAACTT AGTGGAAGTA TCTGATCGGG TATTAGAAGT GATTGAGCTT
GCCAAGCAAG ATCAACAATT CCAAGGTATC CGCTTGTTTA TCATGGAAGA TCAAGCCTCT
GGCGTAAAAT CTTCCCTCTC GGATCTGCTG CTGTCGGGAT TAATCGGTGC CTTGCTGTCT
TTTATCGTGC TGTATTTATT CCTGAGAAAC TTCAAGATGA CCTTGATTGT GGTGTCATCA
GTGCCGATTT CGATTGGAAT GACGCTGGCC GCCATGTACT TGCTGGGTTA CAGCTTAAAC
ATTCTGTCAA TGATGGGGCT GTTATTGGCG GTCGGTATGC TTATTGATAA CGCTGTAGTG
GTCACCGAGA GTGTACTGCA GGAGAAGCAA GGCAAAGCCA CCAATAGCGC AGAGGATAAT
GAAAACGCGG TCATGACAGG GGTCGATAAG GTTAGTCTTG CCGTACTTGC GGGCACTATG
ACCACGGCTA TCGTTTTTTT ACCCAATATC TTCGGGGTAA AAGTCGAGCT CACCATCTTC
CTAGAGCATG TGGCGATTGC GATTTGTATT TCGCTGGCGG CCTCATTATT AGTGGCTAAA
ACATTAATTC CATTGATGTT GACTAAGTTT CACTTCGATA TCGCGCCAGA GAAAGCACCC
GGTAAGTTGC AAAACTTCTA CAATCGTAGT CTCAATTGGG TACTGCTGCG CCCTTGGCGT
TCAGGGCTAA TTTCGGTGGC CATTTTGGTC TCCACCGCCC TGCCGCTGTC TATGGTCAAA
CAGGATCAGG AGGACAGCCA AAGCAAGGAG CGGATTTACA TCAACTACCA AGTAGAAGGT
CGCCATAATC TCAATGTGAC CGAAGCAATG GTGAGCCAAA TGGAAGAGTA TCTTTATAAT
AATAAAGAGG AATTTCATAT CGACTCAGTG TATAGCTACT ATGCGCCTGA CGACGCCTCT
TCGGTGATTT TGCTGAAAAA AGACCTACCT ATGCCACTGG ATGAGTTAAA GAAGAAAATC
CGCAGCGGTT TTCCTAAATT CTCCATCGCG AAACCTCAAT TTGGCTGGGG TAATGATAAC
TCGGGCGTAC GTGTCACGCT CACAGGTCGC TCCACCTCAG AGCTTATCCA TTTGAGTGAG
CAAGTATTAC CCCTGCTCTC CAATATCAAA GGCTTAGTGG ATGTGCGCTC CGAAGTGAAC
GGCGCGCAGC AGGAAGTGGT GATCCGCATT AATCGGCAGA TGGCGGCACG ACTGGATTTA
AAACTCAACG AAGTGGCCTC TAGCATCTCC ATGGCCCTGC GCGGCTCACC GCTGCGCTCA
TTTAGGCATG ATCCCAATGG GGAACTGCGT ATCGAAATGG CCTATGAGAA GGAATGGCAA
AAATCCCTCG AGAAGCTAAA GCAACTGCCC ATCGTACGTA TCGACCAACG CCTGTATACC
CTTGATAACC TTGCCAGTAT CGAGATTTTA CCTAGGTTCG ATACCATCAA GCACTACAAT
CGCCAAACCT CGCTTTCTAT CGGCGCGAAC TTAGACAAGC TCACCACAGA GGAAGCCCAA
ACTAAGATCA AACAGGTGAT GGAAAACGTG CGCTTCCCGA ATGGTTATAA CTATTCGCTG
CGCGGTGGGT TTGAGCGTCA GGATGAAGAT GAGAGCGTCA TGGCTATCAA TATGCTGCTT
GCTATCGCCA TGATTTACAT CGTAATGGCG GCGCTGTTTG AATCTTTATT ATTACCGACG
GCGATTATCA CCTCGATTCT GTTCTCAATC ACTGGCGTCT TTTGGGCATT GCTGCTCACA
GGCACGCCTA TGTCAGTCAT GGCCATGATA GGGATCTTGA TCCTAATGGG AATTGTGGTG
AATAACGGCA TCGTATTGGT CGACCAAATC AACCAAATGA CGCCTGAACT CGATAAGCTG
TCAGATACCA TACGTGAAGT CTGTATTACC CGTCTGCGCC CTGTGCTAAT GACGGTGGGA
ACAACCGTGC TGGGTCTTGT GCCACTGGCG ATGGGCGAAA CCCAAATCGG CGGCGGTGGT
CCACCCTACT CACCAATGGC CATCGCCATT ATCGGCGGTT TGTCGTTCTC AACGGTGACG
AGTCTGTATT TGGTTCCCTT GTGCTATCAA CTGCTCTACA GAATGCGTTA TCGCGCCGCA
GTGCACCTAG GTGAATCAAA CCGCATCGCC CAAAAACTCC TCCCTTGGAC GGTATAG
 
Protein sequence
MNLTRLAIKR PVTTSMFFFA ILLFGLASSR LLPLEMFPGI DIPQIVVQVP YKGSTPAEVE 
RDITKVLEES LATMGGIDEL ESESSQEGAE IEINMKWGEN VATKSLEARE KIDAVRHLLP
KDVERVFIRQ FSTADMPVLT IRISSDRELS GAFDLLDKQL KRPLERVEGV SKVNLYGVEQ
KQIEVRINAN RLAASGYSAT ELQTRLGREN FVLSAGTLRE SNLVYQVSPK GEFRNLEDIK
ALVLLPGLTL DDVADVQFAL PERVEGRHLD KHYAVGLDVF KESGANLVEV SDRVLEVIEL
AKQDQQFQGI RLFIMEDQAS GVKSSLSDLL LSGLIGALLS FIVLYLFLRN FKMTLIVVSS
VPISIGMTLA AMYLLGYSLN ILSMMGLLLA VGMLIDNAVV VTESVLQEKQ GKATNSAEDN
ENAVMTGVDK VSLAVLAGTM TTAIVFLPNI FGVKVELTIF LEHVAIAICI SLAASLLVAK
TLIPLMLTKF HFDIAPEKAP GKLQNFYNRS LNWVLLRPWR SGLISVAILV STALPLSMVK
QDQEDSQSKE RIYINYQVEG RHNLNVTEAM VSQMEEYLYN NKEEFHIDSV YSYYAPDDAS
SVILLKKDLP MPLDELKKKI RSGFPKFSIA KPQFGWGNDN SGVRVTLTGR STSELIHLSE
QVLPLLSNIK GLVDVRSEVN GAQQEVVIRI NRQMAARLDL KLNEVASSIS MALRGSPLRS
FRHDPNGELR IEMAYEKEWQ KSLEKLKQLP IVRIDQRLYT LDNLASIEIL PRFDTIKHYN
RQTSLSIGAN LDKLTTEEAQ TKIKQVMENV RFPNGYNYSL RGGFERQDED ESVMAINMLL
AIAMIYIVMA ALFESLLLPT AIITSILFSI TGVFWALLLT GTPMSVMAMI GILILMGIVV
NNGIVLVDQI NQMTPELDKL SDTIREVCIT RLRPVLMTVG TTVLGLVPLA MGETQIGGGG
PPYSPMAIAI IGGLSFSTVT SLYLVPLCYQ LLYRMRYRAA VHLGESNRIA QKLLPWTV