Gene Shewmr7_1630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1630 
Symbol 
ID4257083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1916641 
End bp1917480 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content46% 
IMG OID638122290 
Producthypothetical protein 
Protein accessionYP_737682 
Protein GI114047132 
COG category[S] Function unknown 
COG ID[COG2996] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0406608 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAGA TAGGAAAAAC CTGCAAACTT GAGGTGGTAA AACAAGTCAG CTTCGGTGTG 
TATTTAAATG CCCACGAGTT TGGCCAAGTA TTACTGCCCA ACAAAGCCAC CCCAAAAGAT
TGCCAAGTCG GTGACTGGCT AGAGGTATTT TTATATCTGG ACTCTGAAGA TATCGTCATT
GCTACCACGC GCAAACCTTT GGCCCAAGTC GGTGAGTTTG CCTATTTAAA AGCGGTGGCA
ACGGGTCCTT ATGGGGCATT TTTAGATTGG GGATTAGATA AAGATCTGTT GCTCCCCTTT
GGCGAGCAGC ACAAACCCAT CGAAGAAGGC CGCTCTTACC TCGTTTACGT GCATGTTAAC
CGCGCGGATG AACGTATTGT CGCCTCATCA AAAATTGATA AGTTCCTCGA TAAGACTCCA
GCTCAGTACG AAGTGGGTCA ACAGGTTGAC TTATATATCG GTGGCACCAC AGATTTAGGC
TACAAAGCCA TTATTAACCA TGCCCACTGG GGCGTGATTT ACCAAAATGA AGTGTTCCAA
AAGCTGCGTT TTGGTCAAAG AGTGAAAGGT TTTATCAAAC AAGTTCGCCG CGATGGCAAA
ATCGATTTGG TCTTGCAGCA AGGCAGTAAG CAAGAGCTCG ATAAGCACGC GCACATTATT
TTGGTGAAAC TCAAACAAGC TGGCGGTTTT TTACCCCTGA CCGATAAAAC CAATGCCGAA
GTGATTTACG AGCAACTCGG CATGAGCAAA AAAGCCTTCA AAAAGAGCAT CGGCGGACTG
TTTAAAGCCG GTAAGTTAAG CATCGATGAT GATGGCTTGC GCCTGACTGA AGCAGACTGA
 
Protein sequence
MIQIGKTCKL EVVKQVSFGV YLNAHEFGQV LLPNKATPKD CQVGDWLEVF LYLDSEDIVI 
ATTRKPLAQV GEFAYLKAVA TGPYGAFLDW GLDKDLLLPF GEQHKPIEEG RSYLVYVHVN
RADERIVASS KIDKFLDKTP AQYEVGQQVD LYIGGTTDLG YKAIINHAHW GVIYQNEVFQ
KLRFGQRVKG FIKQVRRDGK IDLVLQQGSK QELDKHAHII LVKLKQAGGF LPLTDKTNAE
VIYEQLGMSK KAFKKSIGGL FKAGKLSIDD DGLRLTEAD