Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1571 |
Symbol | |
ID | 4254917 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1836805 |
End bp | 1839204 |
Gene Length | 2400 bp |
Protein Length | 799 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638122219 |
Product | hypothetical protein |
Protein accession | YP_737626 |
Protein GI | 114047076 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0110514 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0116836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTGGG CCTTGCTGTT GAAGACGTTT CTCCCCTTAG TGTTATCGAC TGCGGTATTT CTCAGCTCAC CTAGCTTGGC GGGCTCTGTC AGCCAATTTC AATTAACGAT TCCGACCTTA GAAGATGCCG CCAATATTGA TGGCGAATTT GATGAGGCAG TGTGGCAGCA CGCGGCGCAG GCCGAGCTAC GCTATGAGAC TCAGCCCGGT GAAAACACGG CGGCGCCCGT TTACACCGAG GCCAGAATCT ACGCGACCCA AACCAGCCTA TTTGTGGCCT TTACCGCCAA AGATAGTCTG CCACAACATA TTCGCGCCAC GCTCAAGGAC AGGGATAATC TTTGGGGCGA CGATCTAGTA GGGATCAAAC TCGATACCTT TAACAATGCC CGTTTGGCCT ATCAGTTTTT TATCAACCCA CTGGGCGTGC AACTAGACTC GATAGAGAAT GAGCTCACGG GCGAAGAGAG CGAAGCTTGG GATGGCATTT GGAAAACCGC CGGTAAAATC ACCGCCGAGG GTTATCAAGT CGAAGTCGAG TTGCCATTAC GACTATTTAA CTTTGACGAT AAAAAACCTG TTCAAGAATG GGGATTTGAG CTGATCCGCT ACTATCCTCG CAATGAAAAT CATCGCATCT CCACCCATAG AATCGATCGC AACATCAGTT GCCAGCTCTG TCAGCTCGGC GTCGCCACGG GCTTAGCCTC CGCCAAGCAA GGGCAAGATC TGCAAATTAC CCCGTCCTTT GTCGCCAATC GCAATGAGCA AAAAAGCGAA AATGGCTGGG AAGCGCAAAG CAATTATGAA CCCGGGCTCG ATTTACGCTG GGGTATCAAC TCACGCACCT TGCTAAATGC CACCATAAAT CCCGATTTCT CCCAGGTGGA GTCCGATGCT GGCCAGCTTG ATATCAACAG CACTTTTGCG CTGTTTTTTG ATGAGAAACG CCCCTTCTTC CTCGACAATA AAGACTACTT CGATACCCAA GTGAATCTGC TGCATACCCG CAATATTGTA TCGCCGGACT ATGGGCTAAA ACTCACCAGC CAAACCGAGC AACACACTTG GGCATTGCTG GCCGCTAATG ACAGCCAAAC CACCTTTTTG ATGCCAGGGA ATTTAAGTTC TGAGGTCACT TCCTTAGCGG AGGAAAGCCT CAATCTGGCG GCGCGTTACC GCTTCGACAT GGATAAAACC TTCTCCTTTG GGGGGCTTAT CACCGCAAAG AGCAGTGCCG ACAACCAACT GACAGCATTT GCCGAGCAAA ATGATTATCA CAATTATGTC ATGAGCTTAG ATGCGAAATA CCAACCGACA GCTCAGGATA TTTTTACCGC TCAAGTTGCC CAGTCGCAGA CACGCTACCC TACTGCCCTG TATCAACAGT TTTGCGGCAA TGTGGAGGGA GAACTCACAG AAGGGCTACT CTGCGGCCAA ACGCCGTTAA GCTGTGAGTT CGGCCAATGC CAAGTGAATG AGCAAGTGTT ACGTAGCCAA TCGGATCGGG ATTTCAGTGG CGCCCTGTAT CAACTGACCT ATGAACACAA CGCTCGAGAT TGGTTTGCCT ACGGCGAGTA CCACGACGTG TCTCCCGATT TTCGCGCCGA TTTAGGCTTT GTGGAAAAAA TTGATTACCG CACCTTGATG GCCGGTGGTG GCTTGATTTG GTATCCCGAA ACCGTATTTA ACAAGATTAA ATTCGGCGGC GACTGGGATA TCACCCACAA TCAAGCTGGG GAGCAGCTAG AGCAAGAGTT TGAAATCTTT TGGGAAATGT ATGGCGCGCT GCAGAGTGAG TTATCCTTTG GGATAGAAAC TCGGGAACGC GTCGGCCCAC GCCATGACAG CGCGCAACTG GCAGTATTAG GTAACAGCAA TCAATACCAA GAAACCCAAG GTTGGCTTTA CGGCGCGATT ACCCCCACCT CAGCCCTCAG CCTTGAGCTG GAGATCCATT ACGGCGATGA GATTGACTTC CTTAACGATC GATTAGGCAC AAAAACCTTA ATCAATCCGA TATTCAAATG GAAAATTGCC AACGGCCTGT CGGTGGATGT TTCCCATCAA TATCAACATA TGGAACTCGA GCAGGATAAA CTCTTTAGCG CAAATCTCTC GGATGTGCGT CTGCACTGGC AATTGAGTCT GCACAGCTTT ATTCGCCTAT CGAGCATTTA CACCCAAATC GAGCGTAATC TTGCGCAGTA TTTGTATTCG ACACCCGATA GCGAAGAGGC ACACTTAGGG AATGAAATTC TCTACGGCTA CAAACTCAAT CCCCAGAGCG TGTTCTATTT GGGCTATTCC GACAGTTTAA CCTCGGATGA TGAGCTCACG CGGCTCACTC GGGATGAGAA GACCTATTTT ATGAAGCTAA GTTACGCCTG GTTACTCTAG
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Protein sequence | MIWALLLKTF LPLVLSTAVF LSSPSLAGSV SQFQLTIPTL EDAANIDGEF DEAVWQHAAQ AELRYETQPG ENTAAPVYTE ARIYATQTSL FVAFTAKDSL PQHIRATLKD RDNLWGDDLV GIKLDTFNNA RLAYQFFINP LGVQLDSIEN ELTGEESEAW DGIWKTAGKI TAEGYQVEVE LPLRLFNFDD KKPVQEWGFE LIRYYPRNEN HRISTHRIDR NISCQLCQLG VATGLASAKQ GQDLQITPSF VANRNEQKSE NGWEAQSNYE PGLDLRWGIN SRTLLNATIN PDFSQVESDA GQLDINSTFA LFFDEKRPFF LDNKDYFDTQ VNLLHTRNIV SPDYGLKLTS QTEQHTWALL AANDSQTTFL MPGNLSSEVT SLAEESLNLA ARYRFDMDKT FSFGGLITAK SSADNQLTAF AEQNDYHNYV MSLDAKYQPT AQDIFTAQVA QSQTRYPTAL YQQFCGNVEG ELTEGLLCGQ TPLSCEFGQC QVNEQVLRSQ SDRDFSGALY QLTYEHNARD WFAYGEYHDV SPDFRADLGF VEKIDYRTLM AGGGLIWYPE TVFNKIKFGG DWDITHNQAG EQLEQEFEIF WEMYGALQSE LSFGIETRER VGPRHDSAQL AVLGNSNQYQ ETQGWLYGAI TPTSALSLEL EIHYGDEIDF LNDRLGTKTL INPIFKWKIA NGLSVDVSHQ YQHMELEQDK LFSANLSDVR LHWQLSLHSF IRLSSIYTQI ERNLAQYLYS TPDSEEAHLG NEILYGYKLN PQSVFYLGYS DSLTSDDELT RLTRDEKTYF MKLSYAWLL
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