| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1524 |
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| Symbol | |
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| ID | 4258274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1776589 |
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| End bp | 1777779 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638122172 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_737579 |
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| Protein GI | 114047029 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0500753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACAGT TAAAGCTTAA CCCTTATTTC GGCGAATACG GCGGTATGTA TGTGCCGCAG
ATTTTAGTCC CCGCCCTCAA GCAACTCGAA AACGCCTTTG TCGAAGCGCA GGCCGATGAA
TCCTTTCAAG CCGAGTTTAC CGACCTGCTG AAAAACTACG CAGGCCGACC AACGGCACTG
ACCTTAACCC GCAATTTAAG CCCTAATCCT ATGGTAAAAA TCTACCTTAA GCGGGAAGAT
TTACTCCACG GCGGCGCCCA TAAAACCAAC CAAGTATTAG GCCAAGCATT ACTGGCTAAA
CGTATGGGTA AAAAGGAAAT TATTGCAGAA ACCGGCGCTG GCCAGCACGG TGTTGCCACC
GCCCTTGCCT GTGCGCTGCT GGGATTAAAA TGCAAAGTGT ATATGGGCGC GAAAGACGTT
GCCCGCCAAT CACCTAACGT ATTTAGAATG CGTTTGATGG GCGCAGAAGT CATTCCTGTC
ACCTCAGGCT CTGCCACCTT AAAAGATGCC TGTAACGAGG CGATGCGCGA CTGGTCAGGC
AGCTACGAAA AAGCCCACTA TCTATTAGGC ACCGCCGCAG GGCCACATCC CTTCCCGACC
ATAGTGCGTG AGTTCCAACG TATGATCGGC GAAGAAACCA AGAAACAAAT GCTGGAGCGC
GAAGGTCGTC TGCCCGATGC GGTGATCGCC TGTGTCGGCG GAGGCTCTAA TGCCATTGGT
ATGTTTGCCG ACTTTATTGA TGAAACCAGT GTCGAGCTAA TTGGGGTCGA ACCCGCAGGT
AAAGGCATTG ATACCCATAT GCACGGCGCG CCACTCAAAC ATGGCAAAAC CGGGATTTTC
TTTGGTATGA AGGCGCCTTT GATGCAGGAC AGTGAAGGCC AAATCGAAGA GTCCTATTCG
ATTTCGGCGG GTCTTGACTT CCCATCCGTC GGCCCGCAAC ACGCCCATTT GAACGCGATT
GGCCGTGCGC GCTACGAATC GGCCACCGAT GATGAAGCCC TAGAAGCCTT CCAATTATTG
GCTCGCAGCG AAGGGATTAT CCCCGCGCTC GAATCGGCCC ACGCCCTCGC TTACGCCCTG
CGCCTAGCGA GAGAGTGCAC CAAAGAGACC ATTTTGGTCG TTAACCTCTC GGGCCGAGGC
GATAAGGATA TTTTCACTGT GTCAGACATT TTAAATGGTA AAGAGGAATA A
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| Protein sequence | MSQLKLNPYF GEYGGMYVPQ ILVPALKQLE NAFVEAQADE SFQAEFTDLL KNYAGRPTAL
TLTRNLSPNP MVKIYLKRED LLHGGAHKTN QVLGQALLAK RMGKKEIIAE TGAGQHGVAT
ALACALLGLK CKVYMGAKDV ARQSPNVFRM RLMGAEVIPV TSGSATLKDA CNEAMRDWSG
SYEKAHYLLG TAAGPHPFPT IVREFQRMIG EETKKQMLER EGRLPDAVIA CVGGGSNAIG
MFADFIDETS VELIGVEPAG KGIDTHMHGA PLKHGKTGIF FGMKAPLMQD SEGQIEESYS
ISAGLDFPSV GPQHAHLNAI GRARYESATD DEALEAFQLL ARSEGIIPAL ESAHALAYAL
RLARECTKET ILVVNLSGRG DKDIFTVSDI LNGKEE
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