Gene Shewmr7_1519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1519 
Symbol 
ID4258269 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1771811 
End bp1772485 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content53% 
IMG OID638122167 
Productsiderophore biosynthesis protein, putative 
Protein accessionYP_737574 
Protein GI114047024 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.554005 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCC AATGGAGTCG CCACTGTGCG GCCTCACTCT CAAAACCCAT TGTGATTGAT 
GAGTTTGTGC TTAAACCACT CAATCTCCCG CAACAGCTGT CTATGTTGCA GCACTGGTTT
AATCAAGACT ATGCCCGCTT TTGGGGGATG CAGGGGATGA GTCTCGATGC ATTTGCTCAA
GCGATGGCGC CAAGCGCGCA CAAGCTCGCG CTGATCGGTG AATGGCAAGC CAAACCGCTG
TTTATGGTGG AGTTATACGA TCCCGCCCAC GATGAAGTGG GTGAGCATTA CGCCGTGGAG
CGGCGCGATT GCGGCATGCA CCTCATCCTC GCGCCACTTG AGGGCAAGCC TGTTCATGGC
TTGTCCGGCC AAGTGATGCA GGCTATTGCC GAGCTTATTC TCGACAAGCT CGCCTTTAAA
CGAATGGTGG TCGAGCCGGA TCAGCAAAAC CACAAAATCC ACCGCTTAAA TAGCCAAATT
GGGATCCGCT ACCAAAAAGC CATTCAACTG CGTAGCAAAG CCGCATTCCT CGGTTTTTGT
AGCGCCGAGA GTCGCCAATT AGCGCAAAAG ACCAGCACAG CTTTTATGCA GCGCACTGCA
CCCCAAGCGA CTAAAGCGAC TCATGCGACC CACACAACCG CTGTTAACCC TATCATTTTG
CAGGTAAACC GATGA
 
Protein sequence
MASQWSRHCA ASLSKPIVID EFVLKPLNLP QQLSMLQHWF NQDYARFWGM QGMSLDAFAQ 
AMAPSAHKLA LIGEWQAKPL FMVELYDPAH DEVGEHYAVE RRDCGMHLIL APLEGKPVHG
LSGQVMQAIA ELILDKLAFK RMVVEPDQQN HKIHRLNSQI GIRYQKAIQL RSKAAFLGFC
SAESRQLAQK TSTAFMQRTA PQATKATHAT HTTAVNPIIL QVNR