Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1347 |
Symbol | |
ID | 4255419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1562849 |
End bp | 1564189 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638121981 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_737403 |
Protein GI | 114046853 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAAG CCAAATTACT CTTAGTCGAA GACGATGCGT CCCTGCGTGA GGCTTTGCTC GATACCTTAA TGTTGGCGCA ATACGACTGC ATCGATGTGG CCTCCGGCGA GGAAGCCATT ATCGCATTGA AGCAACATCA GTTTGACTTA GTGATCAGCG ATGTGCAGAT GCAGGGGATT GGCGGCTTAG GATTATTAAA TTACTTACAG CAGCATCACC CCAAGCTGCC AGTGTTATTG ATGACGGCGT ATGCCACCAT TGGTAGTGCT GTCAGTGCAA TTAAATTGGG CGCCGTCGAT TATCTGGCAA AACCCTTTGC GCCAGAGGTA TTGCTCAACC AAGTTTCCCG TTATTTGCCG CTCAAACAAA GTAGCGATCA ACCTGTGGTT GCCGATGAAA AGAGCCTCGC GCTGCTATCA CTGGCACAGC GAGTGGCGGC ATCCGATGCC TCTGTGATGA TCCTTGGGCC AAGCGGCTCG GGTAAAGAAG TGTTAGCCCG TTATATTCAT CAACATAGCA GCCGTGCCGA CCAGGCATTT GTAGCCATCA ATTGTGCGGC CATCCCCGAG AATATGCTCG AGGCGACCTT ATTCGGTTAT GAAAAGGGTG CCTTTACTGG GGCTTATCAG GCCTGCCCTG GTAAATTTGA ACTGGCACAA GGCGGCACCT TATTACTCGA TGAAATATCT GAGATGGATT TGGGACTTCA GGCCAAACTG CTGCGTGTGC TGCAAGAGCG CGAAGTGGAG CGTTTAGGCG GTCGTAAAAC CATTAAGTTA GATGTTCGGG TGCTTGCCAC TTCGAATCGG GATTTAAAGG CCGTGGTTGC CGCTGGGCAA TTCCGAGAAG ATCTCTATTA TCGCATTAAC GTGTTTCCAC TGACGTGGCC TGCACTGAAT CAACGCCCTG CGGATATTTT GCCACTAGCT CGGCATTTAC TCGCGAAACA CGCAAAGGCG CTAAATGTGC TTGATTTACC TGAGTTTGAT GAGGCAGCTT GTCGTCGTTT ACTCAGTCAC CGCTGGCCAG GTAATGTGCG CGAGTTGGAT AACGTGGTGC AACGCGCGTT AATTTTACGT GCTGGGGCTG TGATTACCGC CAACGATATT ATTATCGATG CCCAAGATGT GCCTCTGTCA TCCGATGACG CCGAATATGT CAATGAGCCG GAAGGTTTAG GTGAGGAGTT GAAGGCGCAG GAACATGTGA TCATTCTCGA AACTTTAGCG CAATGCCAAG GTAGTCGTAA GTTGGTTGCC GAAAAACTTG GGATCAGTGC GCGCACCTTA AGATATAAGA TGGCCAGAAT GCGCGATATG GGGATTCAAT TGCCCAACTA A
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Protein sequence | MSEAKLLLVE DDASLREALL DTLMLAQYDC IDVASGEEAI IALKQHQFDL VISDVQMQGI GGLGLLNYLQ QHHPKLPVLL MTAYATIGSA VSAIKLGAVD YLAKPFAPEV LLNQVSRYLP LKQSSDQPVV ADEKSLALLS LAQRVAASDA SVMILGPSGS GKEVLARYIH QHSSRADQAF VAINCAAIPE NMLEATLFGY EKGAFTGAYQ ACPGKFELAQ GGTLLLDEIS EMDLGLQAKL LRVLQEREVE RLGGRKTIKL DVRVLATSNR DLKAVVAAGQ FREDLYYRIN VFPLTWPALN QRPADILPLA RHLLAKHAKA LNVLDLPEFD EAACRRLLSH RWPGNVRELD NVVQRALILR AGAVITANDI IIDAQDVPLS SDDAEYVNEP EGLGEELKAQ EHVIILETLA QCQGSRKLVA EKLGISARTL RYKMARMRDM GIQLPN
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