| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1319 |
|---|
| Symbol | |
|---|
| ID | 4258594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1535226 |
|---|
| End bp | 1535786 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 638121952 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_737375 |
|---|
| Protein GI | 114046825 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.30911 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTAC TCTCAACCCT GACGCTAACT ACCGCTTTGC TTTTACCGCT ATTCACCCAA
GCTAAAGAAG TCTCTGGTGT CCAAGTCGCC GACAGCATCA CGCTCAACGC TCAGACGCTG
CAATTGAATG GCGTTGGTGT TCGCAGCAAA TTCTTTATGG ATTTGTATGT GGGTAGCCTG
TATGTCCCCA CCCCGAGCAA AACCATGACC GAGGTGATCA ATGCCCCGGT TGCGGCGATT
CGACTCAATA TTACGTCTGG AATGATTACG TCCGAGAAAA TGCGTGATGC GATAACCGAA
GGTTTTGAGC ACGCGACCGC CGATAATACG ACCGACATTC AGCCACAAAT TGACGCCTTT
ATGGCGCTAT TTAAGGATGA AATCAAAGAA GGCGACCAAT TCACCTTGGT CGCCAACAAA
AGCCGTGGTG TTACCGCCTA TAAAAATGGT CAAGAACAAG CCACGATTGA AGGGGAAATG
TTCCGCCAAG CCTTACTTAA AATTTGGCTA GGGGAAAAAC CAGCCCAGAA GAGCCTCAAA
GAGGCCATGC TGGGCCAGTA A
|
|---|
| Protein sequence | MKLLSTLTLT TALLLPLFTQ AKEVSGVQVA DSITLNAQTL QLNGVGVRSK FFMDLYVGSL
YVPTPSKTMT EVINAPVAAI RLNITSGMIT SEKMRDAITE GFEHATADNT TDIQPQIDAF
MALFKDEIKE GDQFTLVANK SRGVTAYKNG QEQATIEGEM FRQALLKIWL GEKPAQKSLK
EAMLGQ
|
|---|
| |