Gene Shewmr7_1242 details

Gene Information

• Locus tag: Shewmr7_1242
• ID: 4258726
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella sp. MR-7
• Kingdom: Bacteria
• Replicon accession: NC_008322
• Strand: +
• Start bp: 1454161
• End bp: 1454706
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 638121871
• Product: hypothetical protein
• Protein accession: YP_737298
• Protein GI: 114046748

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.976813
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 9
• Fosmid unclonability p-value: 0.827969
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTATTTTA TGGCGAGATC CTCTTTAAAT ATCTCAAAAC ATCAGGGCTT TATATTCTAT 
AACGCCTTGA GTTTTCAGTG TGTTTGGTGG ACTAGCGTAC TATTTGGCAA TAGTGCGCTG 
TTATTGAGTA TTCCGCTGTT AGTGCTGCAT TTTATGTTAC TGCCGTGGGT GGAAACCGCC 
GCCGCTATCC CGCGGGACTT AAGCACAATG CTTAAGATTG GGTTACTCGG TATGGCGGTT 
GATAGCCTGC TTACGTTGGC TAGTGTATTT GAATTTTCGG CTTTTCCCGC TTGGTTGGCG 
TGTCTCTGGT TGCATTTTGC GGTGAGTTTG CACCATAGCC TTAAGCTTAT CCGCGCCTTT 
GCGATTGTAT TACAAGCCAT TTTAGGAGCA ATCTTCGGCA GCCTGAGTTA CTTGGCTGGG 
GCAGCATTTC ATGCCGTGAG CCTTCCCTAT GGTGAGGGCG TTTCTGCGGT GTTTCTCACA 
ATTATTTGGG CTGTGTTACT GCCTCTTTTC ATCAAACTCT CGCGCAGCCA TAGGTCTATG 
GGGTGA 

 

Protein sequence

MYFMARSSLN ISKHQGFIFY NALSFQCVWW TSVLFGNSAL LLSIPLLVLH FMLLPWVETA 
AAIPRDLSTM LKIGLLGMAV DSLLTLASVF EFSAFPAWLA CLWLHFAVSL HHSLKLIRAF 
AIVLQAILGA IFGSLSYLAG AAFHAVSLPY GEGVSAVFLT IIWAVLLPLF IKLSRSHRSM 
G