Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1183 |
Symbol | |
ID | 4258126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1382843 |
End bp | 1383385 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638121804 |
Product | hypothetical protein |
Protein accession | YP_737239 |
Protein GI | 114046689 |
COG category | [S] Function unknown |
COG ID | [COG3860] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.332216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.338767 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAAAC AAATCATCCC TTTTAGCTGT GAAGATATTT CGACGCTGGC TAAATATCTG CGTAATCAAT TTAAAAATTG TGAAAGGTTT CCTTCACACC TTGAAATGCT CAATATTCTT GCCCAGTCTG CAGGACATGC CAATTTCCAA CATTTGCGTG ATGCTGCGTT AACGACAAGT AATGTGGCCA CATTAAACAA ACCCAAACAA CTTGATATTA TTATTCCGCG AAAGCTACAA CCTTTCATGG ACTCAAATTA CATCCTTAGA GCGTGGCCAG CTAAACGCGC CCTTCAAGAT CAAAGTTTAT GGTTTTTTTG GTGTCGTTTT CAGTACCAAC AATCCTACAG TGAACAGGAT GTTAATAGCG TCATTAAGCG TTTTCTTGGA TTTGCTGACT TCGCGCTTAT TAGGCGAGAA TTGTGTAACC ATAAGCTGTT AAAGCGCACC GGCGATGGTC GGCATTATTG GCGAGCAGCA GCAACACCAC CTGAAGAACT CATTTCACTT ACCGAAATTT GGCAGGATTT GGCAGGTTAC TGA
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Protein sequence | MTKQIIPFSC EDISTLAKYL RNQFKNCERF PSHLEMLNIL AQSAGHANFQ HLRDAALTTS NVATLNKPKQ LDIIIPRKLQ PFMDSNYILR AWPAKRALQD QSLWFFWCRF QYQQSYSEQD VNSVIKRFLG FADFALIRRE LCNHKLLKRT GDGRHYWRAA ATPPEELISL TEIWQDLAGY
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