Gene Shewmr7_1183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1183 
Symbol 
ID4258126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1382843 
End bp1383385 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content42% 
IMG OID638121804 
Producthypothetical protein 
Protein accessionYP_737239 
Protein GI114046689 
COG category[S] Function unknown 
COG ID[COG3860] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.332216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.338767 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAAC AAATCATCCC TTTTAGCTGT GAAGATATTT CGACGCTGGC TAAATATCTG 
CGTAATCAAT TTAAAAATTG TGAAAGGTTT CCTTCACACC TTGAAATGCT CAATATTCTT
GCCCAGTCTG CAGGACATGC CAATTTCCAA CATTTGCGTG ATGCTGCGTT AACGACAAGT
AATGTGGCCA CATTAAACAA ACCCAAACAA CTTGATATTA TTATTCCGCG AAAGCTACAA
CCTTTCATGG ACTCAAATTA CATCCTTAGA GCGTGGCCAG CTAAACGCGC CCTTCAAGAT
CAAAGTTTAT GGTTTTTTTG GTGTCGTTTT CAGTACCAAC AATCCTACAG TGAACAGGAT
GTTAATAGCG TCATTAAGCG TTTTCTTGGA TTTGCTGACT TCGCGCTTAT TAGGCGAGAA
TTGTGTAACC ATAAGCTGTT AAAGCGCACC GGCGATGGTC GGCATTATTG GCGAGCAGCA
GCAACACCAC CTGAAGAACT CATTTCACTT ACCGAAATTT GGCAGGATTT GGCAGGTTAC
TGA
 
Protein sequence
MTKQIIPFSC EDISTLAKYL RNQFKNCERF PSHLEMLNIL AQSAGHANFQ HLRDAALTTS 
NVATLNKPKQ LDIIIPRKLQ PFMDSNYILR AWPAKRALQD QSLWFFWCRF QYQQSYSEQD
VNSVIKRFLG FADFALIRRE LCNHKLLKRT GDGRHYWRAA ATPPEELISL TEIWQDLAGY