Gene Shewmr7_1139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1139 
Symbol 
ID4256739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1321987 
End bp1322400 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content48% 
IMG OID638121760 
Productthioesterase superfamily protein 
Protein accessionYP_737195 
Protein GI114046645 
COG category[R] General function prediction only 
COG ID[COG0824] Predicted thioesterase 
TIGRFAM ID[TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCAAT TTAGCCCAAG TTATTCTTTC CCTGTGCAAA TTTACTACGA AGATACGGAT 
TTTTCTGGCG TGGTGTATCA CCCGAACTTT TTGAAATACT TCGAGCGCGC CCGTGAGCAT
GTGATTGGTG CCGAGCGTTT ACGCGACCTC TGGCAACAGC AGCAATTGGG TTTTGCGGTG
TATCGCAGCG ACATGTTGTG CCACGAAGGG GTGGAGTTTG CCGATATCAT CGATATCCGC
ACTAAGTTCT ACTTTGAGAG TAAATATCGC ACTGTCTGGC ATCAGGAAAT TTGGCGCCCA
AACGGTAAAA AACCAGCGGT TACGGCTACT ATCGAAATGG TATGTATGAA TCAAGCTCGG
CAACTTGCGC CTATGCCCGC CGACTTAATT GCCCAATTAA GCCTAGGGAT GTGA
 
Protein sequence
MPQFSPSYSF PVQIYYEDTD FSGVVYHPNF LKYFERAREH VIGAERLRDL WQQQQLGFAV 
YRSDMLCHEG VEFADIIDIR TKFYFESKYR TVWHQEIWRP NGKKPAVTAT IEMVCMNQAR
QLAPMPADLI AQLSLGM