| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1109 |
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| Symbol | |
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| ID | 4258751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | - |
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| Start bp | 1280607 |
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| End bp | 1282979 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638121730 |
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| Product | type IV pilus assembly PilZ |
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| Protein accession | YP_737165 |
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| Protein GI | 114046615 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.618893 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTAG ATAACCATAG TGCACTCATA GAACAGCTCA AGCCGCTGCT CATGGAACCG
AATTTCCAGG AGATTTTCCA GCAGTTGACT GTCGATGAAA ACAATTCGAC CCGTTTTCTG
CTGAAAATGG AGTTGAATCG TTTGGCTTCT CCCTGCACTC GGATTATCGA TCTTAGGGAC
AAATCTGAGT TGCCCTGCAC CGAAGTCATG CTCGGCCAAC AGCGTCATTT TCTCGATGAG
CCAGCCAAGC ATAGCCTACA AGCGGCTATG TCCTTGTACC GCAATAAATA CACTCTTGGC
GTGTATGAAT ACGTCATCGC TGCCCATCAA CAGCGGCGAC AAAAATTGCG TCAGGTGACA
CAACAAACCG ATAGCGTCGA ACCCGAACCC TTTATGGTCC CTGGCGTAGT GCTCGGCAGT
TATTTTAACC GCGCCGAAGA GCGGATGAAT TACAGTATCC GCATTGCGGT GTCGCAACCC
GGGCGGACGG AAATGCCGGG GATCACCGTC GATTTATCGG TTGGCGGTGC GCGTATTCGC
TTAGCGGCAA ATCATCACTT CGATCTCGAC AAGCCCCTCA AGGTCAAACT GCTCGAGCTT
AGTGAAGAAT ATTACTACCC CGATCTACAA CTTGGGGTCG ATTATCAGAT TGTCGACAGT
CAAACCAATG GTGAATTCAT TTGGTTGCGA TTACGGCGGA TTGGTGGCAC CGATGCTTTA
GGTGAAATGC TGGGCAATTT GATCCGTGGT TATAAACTTC GTTATAAGCT GGATGTAAAT
GACGTCTTAG TGACGGCATC GGGTCTGGGG TTCGAGCGTC ATTACCTACC ACACCTGCCG
CATCTGCCTT TGTTTCTCAA TCAGCAGTCC CAATCCATCA CCCATATGCT GCTGAGCCGC
GACAATCAGC AGATAGTGCA TTATTTTCAG GATGAGAATG ATATCAGCCA GTTGCCCGCC
ATGCTGACGC CAGTAAGGCT CTCTGCGCTG GTCAATCATC CCGAAAACCC CGATTACGGA
CTGTTTTTTA GCTTTACCTA CAACGCCCAA GGCTCACTGT ATTTCTACTC GGCAACCTTA
GCCGAATTAA AAGCCAAGGG CTTGATGTCC TTATTTTTAG GTTTTGCCTC TACCAAACCG
AGCTGGCGTA TTTACAAACT CATCCCAGAT AAGATTTACC ATGCCAAAGG CTATCGCCGT
GCGACCTTGC CGGGGGATGA CGCTAAGTAC AGCCCGCTGG TGGAGCAGCA ATTGTCCCAG
TTCAGCCATA TGCTGCAACT TATAGACCTC ACCAATGAAG ATGAAAGAGC GACCTATAAA
GCCTGGCAGG ACGATAGCAA TGCCAATGCG CTCAAAGCCT TTGGCCAGCA GCGCCTAACG
GCACACCAAA TCAAGCCGGT TTCGATGCAA TTTAGTGAGC GTCGACAGGA GGCACGTTTT
GCCTTCAAAA CCTTAGTCAA TGTGTCACAG GGAGCCCTAA AAGCGACGGG GATAACCTTA
GATATTTCTG GCAGAGGCAT GCAGCTCACC TTAGATAATC CGGCTGAGTT TGTTGCGAAC
AAACCTCTGA TGATTAGCTT ACCTAAGTTG CAAACCATCG CCGGTAAGAC TCAGTTAGAT
AATTTGCCCT ACCGCCTAGT GCGTACCCGT AAAAATGGCG TGACGCTCCA TTTAGCCGCA
GTCATGGGCC ATACGCCCCA TGTTGGTGTA GAATTTTTAA ACAAGCTAAT TGCCCATAAC
CGTGAAAAAC TCGAGCAGTT GACCGAAAAC AACAGCGAAG TCAAAGAGCT GGCCGATGGG
TTGAAAAATA TTCTGCTGCG CGAGCTACAT TCTGTCCCTT ACTTTGTTGA AAGAACGACA
AAATCGGCTC AAATCGCCTG TTTAGGCGTC AGCACTGAGC ATGATGAGAT CAGTGATATT
TTTGCTGCAG GCTCTTCGGA TACTTTGCAA TATAATCTCG CACCGCTGCT AAAAGATGGC
TTCTTCAAAC GGGATATTCT CGAGCCTATT CGCCAAATGA AGCCGCAGCA GGATATGGAT
TTTATTGAGG TGTTTATCCA GTTAACCCGC CAGTCCCGCG GTCAATTCCA TTTAAAATGT
GTGCCCGCAA CCGAGCTTGG AGATGCGCAG GCCAAAATCG CCTTTATCAA CCAAAGTAAA
CTGGCGGGAC GCTTTATGGC GCTGCGGATT TACCGTGGTG CAACCGAGAA ACCGGATATG
GGTTACCTGC GCCGCGAATT GGAATACATC AATATCCACG CAAACCACAG GGCGAAACAA
CTCGAGGAAC AACTTTGGCG GATTATCGGT GTAGGTGAGC TACTCGATAT CACCCAAGAG
GTGGAGCTGC GCTATCCTGC GCTGCAAAAA TAA
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| Protein sequence | MSLDNHSALI EQLKPLLMEP NFQEIFQQLT VDENNSTRFL LKMELNRLAS PCTRIIDLRD
KSELPCTEVM LGQQRHFLDE PAKHSLQAAM SLYRNKYTLG VYEYVIAAHQ QRRQKLRQVT
QQTDSVEPEP FMVPGVVLGS YFNRAEERMN YSIRIAVSQP GRTEMPGITV DLSVGGARIR
LAANHHFDLD KPLKVKLLEL SEEYYYPDLQ LGVDYQIVDS QTNGEFIWLR LRRIGGTDAL
GEMLGNLIRG YKLRYKLDVN DVLVTASGLG FERHYLPHLP HLPLFLNQQS QSITHMLLSR
DNQQIVHYFQ DENDISQLPA MLTPVRLSAL VNHPENPDYG LFFSFTYNAQ GSLYFYSATL
AELKAKGLMS LFLGFASTKP SWRIYKLIPD KIYHAKGYRR ATLPGDDAKY SPLVEQQLSQ
FSHMLQLIDL TNEDERATYK AWQDDSNANA LKAFGQQRLT AHQIKPVSMQ FSERRQEARF
AFKTLVNVSQ GALKATGITL DISGRGMQLT LDNPAEFVAN KPLMISLPKL QTIAGKTQLD
NLPYRLVRTR KNGVTLHLAA VMGHTPHVGV EFLNKLIAHN REKLEQLTEN NSEVKELADG
LKNILLRELH SVPYFVERTT KSAQIACLGV STEHDEISDI FAAGSSDTLQ YNLAPLLKDG
FFKRDILEPI RQMKPQQDMD FIEVFIQLTR QSRGQFHLKC VPATELGDAQ AKIAFINQSK
LAGRFMALRI YRGATEKPDM GYLRRELEYI NIHANHRAKQ LEEQLWRIIG VGELLDITQE
VELRYPALQK
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