| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1105 |
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| Symbol | deoD |
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| ID | 4258676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1276335 |
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| End bp | 1277045 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638121726 |
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| Product | purine nucleoside phosphorylase |
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| Protein accession | YP_737161 |
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| Protein GI | 114046611 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0813] Purine-nucleoside phosphorylase |
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| TIGRFAM ID | [TIGR00107] purine-nucleoside phosphorylase, family 1 (deoD) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00182057 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAACAC CACACATTAA TGCTGTAGAG GGCGCATTCG CTGAGACAGT TCTGTTTCCA
GGCGATCCAT TACGTGCAAA ATATATTGCT GAAACATTCT TAGAAAATGT TGAGCAAGTG
ACTGACGTTC GAAACATGCT AGGTTTTACC GGTACTTACA AAGGTAAACG TATTTCTGTT
ATGGGTTCAG GCATGGGTAT TCCTTCATGC TCAATCTATG CAACTGAATT AATTAAAGAC
TACGGCGTTA AGAACCTGAT CCGCGTGGGT ACTTGTGGCG CGATCAGCAC TGACGTTAAA
GTGCGCGATG TGATCATCGG CATGGGTGCT TGTACCGATT CTCAAGTTAA CCGTTTACGT
TTCAAAGGCC AAGATTTCGC TGCTATCGCG AACTACGAGC TGATGAATGC TGTGATCGAA
TCTGCCAAAG TGAAAGGCAC TAAGATCCGT GTTGGTAACG TTTTCTCTGC CGACCTGTTC
TACACTCCTG ATCCACAAAT GTTTGACGTG ATGGAAAAAA TGGGCGTGTT AGGCGTAGAG
ATGGAAGCCG CTGGTTTATA CGGTGTTGCC CATGAATTCG GTGCTCGTGC ACTGTGTGTG
GTAACTGTAT CTGACCATAT CCGTACTGGC GAAAAAACCA CTTCTGATGA GCGTCAAACC
ACGTTCAACG ATATGATCGT GATGACATTA GACGCTGCAA TTACGCTGTA A
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| Protein sequence | MATPHINAVE GAFAETVLFP GDPLRAKYIA ETFLENVEQV TDVRNMLGFT GTYKGKRISV
MGSGMGIPSC SIYATELIKD YGVKNLIRVG TCGAISTDVK VRDVIIGMGA CTDSQVNRLR
FKGQDFAAIA NYELMNAVIE SAKVKGTKIR VGNVFSADLF YTPDPQMFDV MEKMGVLGVE
MEAAGLYGVA HEFGARALCV VTVSDHIRTG EKTTSDERQT TFNDMIVMTL DAAITL
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