| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1104 |
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| Symbol | |
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| ID | 4258675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1275029 |
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| End bp | 1276243 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638121725 |
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| Product | phosphopentomutase |
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| Protein accession | YP_737160 |
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| Protein GI | 114046610 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1015] Phosphopentomutase |
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| TIGRFAM ID | [TIGR01696] phosphopentomutase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000314431 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACGTA CAGTTATAAT GATGTTGGAT TCCTTTGGCG TAGGCGCCGC TGGCGATGCC
GCCAAGTTTG GGGATCTAGG TTCTGATACT TTTGGCCATA TCGCTAAAGC GTGTGCCGAA
GGTAAAGCCG ATATCGGCCG TGAAGGTCCG TTAACGCTAC CAAATTTGGC GCGTTTAGGT
TTAGCCCATG CGGCGATGGA AAGCACTGGG GCGTTTGCTC CAGGCTTTGC GGACGATGTT
GAGCTGATTG GTGCCTATGG CCACGCTCAG GAATTAAGTT CGGGTAAAGA TACTCCGAGC
GGTCACTGGG AAATGGCGGG TGTGCCCGTA TTATTCGACT GGGGCTATTT CAGCGAGCAC
CAAAACTCGT TCCCTAAAGA GCTGACAGAT AAGATTCTCG CCCGTGCAGG ACTCGATGGC
TTTTTAGGTA ACTGCCATGC TTCTGGTACC ACGATTCTGG AAGAATTAGG CGAAGAGCAC
ATGCGTTCTG GCAAGCCGAT TTTTTACACT TCGGCGGATT CGGTATTCCA GATTGCCTGC
CATGAAGGCA CATTTGGTTT AGAAAATTTA TATCGTCTTT GCGAAATCGC CCGTGAAGAG
TTAGAGCCTT ACAACATTGG CCGCGTGATT GCGCGTCCAT TCGATGGCAC TGGCCCAAAC
GACTTTGCTC GTACTGGCAA CCGTAAGGAT TACTCCCTCG AGCCGCCAGC GAAGACAGTA
TTAGATAAGT TAAAAGCCGC GGGTGGTGAA GTGGTAAGTG TGGGCAAGAT TGCCGATATT
TACGCTTACT GTGGCATCAC CAAAAAGGTG AAGGCAAACG GTTTAGAAGC GCTATTTGAT
GCGACTTTAG CCGAAGTGAA ATCAGCGGGT GAAAATACTA TTGTATTCAC TAACTTTGTT
GATTTTGACT CCCACTATGG TCACCGCCGC GATGTGGCAG GTTATGCGAA AGGGCTGGAG
TATTTCGACT CGCGTTTACC TGAAATGCTC TCGCTGCTGG ATGAGGATGA TCTGTTAATC
CTCACTGCTG ACCATGGTTG CGACCCAACA TGGCAAGGTA CTGACCATAC CCGTGAATAT
GTGCCTGTAT TGGCTTATGG CGCAGGGCTG AAAGCGGGCT CACTCGGTCG CCGTAACAGC
TTCGCCGATA TCGGCCAATC TATTGCGAGC TACTTCAAGC TTGAGCCGAT GGAATACGGT
GAGTCGTTTA TCTAA
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| Protein sequence | MKRTVIMMLD SFGVGAAGDA AKFGDLGSDT FGHIAKACAE GKADIGREGP LTLPNLARLG
LAHAAMESTG AFAPGFADDV ELIGAYGHAQ ELSSGKDTPS GHWEMAGVPV LFDWGYFSEH
QNSFPKELTD KILARAGLDG FLGNCHASGT TILEELGEEH MRSGKPIFYT SADSVFQIAC
HEGTFGLENL YRLCEIAREE LEPYNIGRVI ARPFDGTGPN DFARTGNRKD YSLEPPAKTV
LDKLKAAGGE VVSVGKIADI YAYCGITKKV KANGLEALFD ATLAEVKSAG ENTIVFTNFV
DFDSHYGHRR DVAGYAKGLE YFDSRLPEML SLLDEDDLLI LTADHGCDPT WQGTDHTREY
VPVLAYGAGL KAGSLGRRNS FADIGQSIAS YFKLEPMEYG ESFI
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