Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1067 |
Symbol | |
ID | 4257327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1231527 |
End bp | 1231988 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638121679 |
Product | putative metalloprotease |
Protein accession | YP_737123 |
Protein GI | 114046573 |
COG category | [R] General function prediction only |
COG ID | [COG0319] Predicted metal-dependent hydrolase |
TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0246117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.0221879 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTTG ATTTAGCCTT AGATGTGCAA TACGCCACGG CGAGTGACTA TCTGCCGAGT GAAGAGCAGT TTTCCCTCTG GGTAAAAACC GCCATTGGTA ACAGCATGGA ACAGGCGGAG CTGACCATTC GCATCGTCGA TGCCCGTGAA AGCCAAATGC TAAACAGCAC CTACAGAGGG AAAGACAAAC CGACCAATGT GTTGTCGTTT CCCTTTGAAG CACCGCCAGA AATTGAACTT CCACTGCTTG GAGATCTTGT CATTTGTGCC GCAGTCGTTG AAAATGAAGC GCGTGAACAA GATAAAATCC TAGAAGCCCA TTGGGCACAC ATGGTTGTAC ATGGTTGCCT GCATCTGCTA GGTTATGATC ACATTGAAGA CGAAGAAGCC GAAGAGATGG AGTCGTTAGA GACTCAACTC ATTGAAAGCT TAGGTTTTAC CGACCCATAT AAGGAACAAT AA
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Protein sequence | MSLDLALDVQ YATASDYLPS EEQFSLWVKT AIGNSMEQAE LTIRIVDARE SQMLNSTYRG KDKPTNVLSF PFEAPPEIEL PLLGDLVICA AVVENEAREQ DKILEAHWAH MVVHGCLHLL GYDHIEDEEA EEMESLETQL IESLGFTDPY KEQ
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