| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_1049 |
|---|
| Symbol | |
|---|
| ID | 4255525 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008322 |
|---|
| Strand | - |
|---|
| Start bp | 1213690 |
|---|
| End bp | 1214655 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 638121661 |
|---|
| Product | lipoyl synthase |
|---|
| Protein accession | YP_737105 |
|---|
| Protein GI | 114046555 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0320] Lipoate synthase |
|---|
| TIGRFAM ID | [TIGR00510] lipoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00710809 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0056856 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGGC CTGAACGTTT ACAACCCGGA GTCAAATTAA GAGATGCCGA TAAGGTCTCG
CGCATTCCGG TTAAAATCGT GCCCTCTGAG CGCGAAACCA TGTTACGCAA ACCCGATTGG
TTAAGGGTCA AACTGCCCGC TTCTAACCAA CGTATTCTCG AGATCAAGCA AGCATTACGT
TCGAACGGTC TGCACTCGGT CTGTGAAGAA GCTTCTTGCC CTAACTTGGC AGAATGTTTT
AACCACGGCA CCGCGACCTT TATGATTTTG GGCGCAATTT GTACTCGCCG CTGCCCATTC
TGCGACGTAG CCCACGGTCG TCCTCTCAAG CCCGATGCGG ATGAGCCAGT CAAACTGGCA
CAAACCATTC GCGATATGAA GCTGAAATAC GTGGTTATCA CCTCGGTTGA CCGCGATGAC
CTGCGTGATG GCGGAGCCCA GCACTTTGCC GACTGTATCC GTGAGATCCG TAAGCTCAAT
CCTGAAATTA AGATTGAGAT CTTAGTGCCC GATTTCCGTG GTCGTATCGA CGCCGCCCTC
GACATTCTGT CGACTGAGCC GCCTGATGTG TTCAACCACA ACCTCGAAAC TGCGCCTATG
CATTACCGCA AAGCGCGTCC GGGTGCGAAC TATCAATGGT CACTCGACCT GCTGAAGCGC
TTTAAAGAGC GTCACCCCAA TGTGCCGACA AAATCGGGAC TGATGATGGG TCTAGGTGAA
ACCAACGAAG AAATTGCTCA AGTGCTGCGT GACCTACGTG AGCACAAGGT CGAAATGTTG
ACCTTAGGCC AATATCTGCA ACCGTCTAAG TTCCACCTGC CGGTTGAGCG TTACGTGTCA
CCAGCCGAGT TCGATGAGCT TAAAGTCCTT GCCGATGAGC TTGGCTTTAC TCACGCCGCC
TGTGGTCCAT TAGTACGTTC AAGCTACCAT GCCGACCTGC AAGCTCAAGG TAAAGAAGTG
AAGTAA
|
|---|
| Protein sequence | MNRPERLQPG VKLRDADKVS RIPVKIVPSE RETMLRKPDW LRVKLPASNQ RILEIKQALR
SNGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK PDADEPVKLA
QTIRDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRKLN PEIKIEILVP DFRGRIDAAL
DILSTEPPDV FNHNLETAPM HYRKARPGAN YQWSLDLLKR FKERHPNVPT KSGLMMGLGE
TNEEIAQVLR DLREHKVEML TLGQYLQPSK FHLPVERYVS PAEFDELKVL ADELGFTHAA
CGPLVRSSYH ADLQAQGKEV K
|
|---|
| |