Gene Shewmr7_1021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1021 
Symbol 
ID4255707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1181667 
End bp1182488 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content52% 
IMG OID638121633 
Producthypothetical protein 
Protein accessionYP_737077 
Protein GI114046527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.447996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGTT CTTTAAACTC AGCGGATCTC GCCAGAGCGA TCGATGGTCC ACGGATCGCA 
ATACCCCGTG CATCAATTCA AGCTCTTGGA CTGGAAGCCG CTGCATTTTT ACAACAAGCG
TCGTTTCTAA GCAGCCTAAA GGCAGAAGCA GGCGGGTGGT TTGACCTACC TGCCGAGGGA
GAGCCAGATC CTGAGGCTAC CAACATTTTC TCAGAGCTCG GGAGCTGGCA AGCATGCCTC
GGAATTCAGA GAGATGCCCT CCGTAAAATC CGGCGCAAGC TTTGCGAAAT GAGTTTGCTG
GAGGAAAAAC GAGCGGGGGT TCCCGCACGC TTGCACTACC GTGTAAACCA CGACGCTTAC
CTGCGTTTTC TCGCTGATCG CGGCCAGAAA ATCCAGAATG CGGAAAATCG CAAACTGGAC
GGCGAATATC CGCAAACTAG TTTGCAAGGA TCACGCATAC AAGAATGCGG AGTTCCGGCA
GACTATTCCA GAGAGATCCC AGAGAGCTTC AAAGATATTA ATACGCGCTT TAATTTTGTT
GAGGCTCTCG TATCAAGGGG AGTAGATCAG GTCCACGCCC GCGAGTGGCA AGCAATCCGT
AAAAAGAAGC GAGTTACCCT CACAAAGGAT GCTGTACTAC TCGTAGAACG GGAGGCAGCG
AAAGTTGGTG TTCCCCTAGG GGACGCGATC GAAACATGTG TTTTAAGGGG ATGGGCTGGC
CTGAAGGCGG ATTGGCTGAT ACCCAACAGA GAACGAAGCT CACAAACTCG CTCGCTTGTT
GAAGACCTAA CAGATACAAG CTGGGCACAG GGGGGATGGT GA
 
Protein sequence
MNSSLNSADL ARAIDGPRIA IPRASIQALG LEAAAFLQQA SFLSSLKAEA GGWFDLPAEG 
EPDPEATNIF SELGSWQACL GIQRDALRKI RRKLCEMSLL EEKRAGVPAR LHYRVNHDAY
LRFLADRGQK IQNAENRKLD GEYPQTSLQG SRIQECGVPA DYSREIPESF KDINTRFNFV
EALVSRGVDQ VHAREWQAIR KKKRVTLTKD AVLLVEREAA KVGVPLGDAI ETCVLRGWAG
LKADWLIPNR ERSSQTRSLV EDLTDTSWAQ GGW