Gene Shewmr7_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_1007 
Symbol 
ID4255693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1165165 
End bp1166298 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content52% 
IMG OID638121618 
Productendonuclease/exonuclease/phosphatase 
Protein accessionYP_737063 
Protein GI114046513 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.65557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACAGC ATTCCCCAGA ACCGTCGAGC TCGGCGAATA CAACACAATC GAATATTAAA 
ATTGCGACCG TGAATCTATT TAACTTTATC GAGCCGCCCT CAGCCTTTTA CGATTTTGAG
AATATCTATA GCCACGGCCA ATGGCAGAAA AAGTGCCAGT GGTTTAGCGA GTTATTGGAT
CAACATCATC CGGATATTGT CGGGTTTCAG GAGGTATTTA GCCCCGAACC GTTACGCCAG
CTTGCGCTGC AGCAGGGATT AACCCACTTT GCGGTGGTCG ATAGTGCGAC CTTGGTTAGT
GACTATATCT ACCAAAGCCC TGTGGTGGCG TTGGCGTCTC GCTTCCCTAT CCTTGAGGTA
CACGCTATCG AACCAGAGGT GCACTTAGTG GCGGCGATGG GGCTGTCGAG CGAATTTAGC
TTTAGCCGTA AAGTGTTACG GGCGACGGTG GCGGTGCCGC AGATTGGTCC CTGTGATTGC
TATGTGGTGC ATTTTAAATC TAAGCGGCCG GGATTGGCTT TAGAGCCGCA TCCTATGGGC
TTGTCGTTAA ATGCACCGTC GGATCTTAAG TTACATGCCG AGACTAAGCT ATTAACCGAA
CAGGCCCTCG GGCGTTGGGC GTCGACCATG CAGCGGGGCG CCGAGGCGGC ATTGCTGTTC
CATGCCATAC TCGCCAGAAG ACAGAGTGCC AAACATCCGG TGATCCTGAT GGGGGATTTT
AACGATAGTT TGTCCTTAGG CGCGTTGGAT GCGTTAACCC TCCAAGGCGA AGCGCTGCAC
AGTAACGATA TTAAAGCCGC TGGGCTTGGG CATTTATCCG ATGTGATGTT AGCGCAAGTG
TTTGCCCACT ATCGATTACA AGATGCTTAT GAGCTGTTTA TCGAAGCCAA TTTAGCCGAT
AACGCCGCCC ATTACCGTGA ACATAGGGCG CCCACCCATT ACTATGGCCC TAAAGGATCT
GTGCTGGATT ATGTGTTGCT CTCCAATGAG TTTGATGCCA GCGATAGCCG CAGTTTGGCG
CAGGTGGTGG ATTATCAGAC CTGTGATAGA CACTTAGTCA GGCCCGAATA TGAGCGCGAT
GCCTATAGTA CCGACCATGC GCCTGTGATG GTTGAATTGG CACTGCGGCG TTAG
 
Protein sequence
MSQHSPEPSS SANTTQSNIK IATVNLFNFI EPPSAFYDFE NIYSHGQWQK KCQWFSELLD 
QHHPDIVGFQ EVFSPEPLRQ LALQQGLTHF AVVDSATLVS DYIYQSPVVA LASRFPILEV
HAIEPEVHLV AAMGLSSEFS FSRKVLRATV AVPQIGPCDC YVVHFKSKRP GLALEPHPMG
LSLNAPSDLK LHAETKLLTE QALGRWASTM QRGAEAALLF HAILARRQSA KHPVILMGDF
NDSLSLGALD ALTLQGEALH SNDIKAAGLG HLSDVMLAQV FAHYRLQDAY ELFIEANLAD
NAAHYREHRA PTHYYGPKGS VLDYVLLSNE FDASDSRSLA QVVDYQTCDR HLVRPEYERD
AYSTDHAPVM VELALRR