| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr7_0998 |
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| Symbol | |
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| ID | 4255298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008322 |
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| Strand | + |
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| Start bp | 1153077 |
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| End bp | 1154432 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638121609 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_737054 |
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| Protein GI | 114046504 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATTC CTAAGCCTTT TTCTTCCACA GAGTCTTCCC CAGAGTCGTT AACCTTTGCC
GAGCTTGGCG TCAATGCGGC GTTATGTTCG GTATTGCCTG CCGCGCTTAA GCATCCAACA
CGGGTACAGC AATTAGCGAT TCCTGCGATT CTTGCGGGGC GAGATGTGTT AGCGCTGTCG
CAAACCGGTA GCGGTAAGAC CTTGGCTTTC GGATTGCCCT TGCTACAAGC TATCCATCAA
CAACTTCAGC AGCAAGTCGT ATTAGCGGGG GCAGAGTCAG TCTCGGCCTC GGCCAGCAAT
GCGCTGGCCT TGGTGCTCGT ACCGACACGG GAATTGGCGC AGCAGGTAAC GATAGCGCTG
CACGCGCTGG CGAGTAAGTT ATCGTCTTCT TTGAATATTC AGCTTCTCTG TGGCGGCATA
GCGCAGGAAG ACCAATTAGC CGAACTTGCC GCTAAACCGC AGCTTGTCGT CGCAACCCCT
GGGCGCTTAT TGGATTTATG CACTCAGTCC CATATCAGTC TCGACTCGAT AAAATATCTA
GTGCTAGACG AAGCCGACCG CTTATTGGAA ATGGGATTTT GGCCTGATGT GCAAAAGCTG
ATGGCAATGA TGCCTAAGCG TAAGCAAACC TTACTGTTTT CAGCCACCTT GCCAGAGGCG
TTGGGTACCT TGGCGGGTAA ATTGCTGACC AACAATCCCC TTCGGGTTGA GGCCAGTACA
CGCAATGCTG TCGCCGCCGA CATCGAAGAG CGACTGTATC TAGTCAATAA GGGCAGTAAG
GCGCAGGCAT TGATTGCGTT ACTCAAACAA TATCAATGGC CGCAAGTGCT AGTGTTTATC
AGTGCCCGCG ATGATGCGGA TGCGATAGCG AAACGACTCG TTAAGGCAGG GATAAATGCT
GCTGCACTGC ACGGTGAAAA AGAGCAAACC GTGCGCAGTC AAACCTTGGC CGACTTTAAA
GCCAATCGCA TTCAAGTGGT AGTGGCGACG GATTTAATGG CCCGTGGTAT TCATGTCGAT
GCCTTGCCTG TGGTGATCAA CTTAGACTTA CCCATGAGTG CACCTGTATA TGTGCACCGC
ATTGGCCGCA CCGCAAGGGC GGGCGCTAAA GGGCTTGCCA TCTCTTTGGT GTGCCATGGT
GAAATGCCAA GTTTAATCGC AATCCGCAAC TTGACGGCAC GTGAGTTATC GCTAGCATCC
TTGGCGGACT TTCCTGTGAC CGATAAGCCG AGCGAAAGAA CTAGAGAGGA CGGTACCGAG
AATAAAGTGG CGCCTAAGCG CCCACCTCGG GATAAACAGG CGAATCGTCG CAGTCTTAAT
AAGCACAGCA TCAAAGCCTT TAAAGGCAAG CGTTGA
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| Protein sequence | MTIPKPFSST ESSPESLTFA ELGVNAALCS VLPAALKHPT RVQQLAIPAI LAGRDVLALS
QTGSGKTLAF GLPLLQAIHQ QLQQQVVLAG AESVSASASN ALALVLVPTR ELAQQVTIAL
HALASKLSSS LNIQLLCGGI AQEDQLAELA AKPQLVVATP GRLLDLCTQS HISLDSIKYL
VLDEADRLLE MGFWPDVQKL MAMMPKRKQT LLFSATLPEA LGTLAGKLLT NNPLRVEAST
RNAVAADIEE RLYLVNKGSK AQALIALLKQ YQWPQVLVFI SARDDADAIA KRLVKAGINA
AALHGEKEQT VRSQTLADFK ANRIQVVVAT DLMARGIHVD ALPVVINLDL PMSAPVYVHR
IGRTARAGAK GLAISLVCHG EMPSLIAIRN LTARELSLAS LADFPVTDKP SERTREDGTE
NKVAPKRPPR DKQANRRSLN KHSIKAFKGK R
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