Gene Shewmr7_0939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr7_0939 
Symbol 
ID4256241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-7 
KingdomBacteria 
Replicon accessionNC_008322 
Strand
Start bp1075082 
End bp1076032 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content51% 
IMG OID638121550 
ProductWD-40 repeat-containing protein 
Protein accessionYP_736995 
Protein GI114046445 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000121304 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0978141 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA CCCTACTGCT GGTATTTTGC ACAATTTTTT TAGCGGCATG TCAGCCAAAA 
GCCGATGATA TTCGTGTACT TTCACAGGAA CCGTCATACA GCGCGAGCCT CTCTAGCGAC
GGCAATATCG CCATTGTCGC CACCCAAAGC CAAGGGGTGC AATGTTGGGA CTTAACCACC
CACAGCCTCA AATACCAATG GGTTCATGGG GATCTCAATA CTGGCGTCAC CGCAACCGCC
ATTTCCCCTA ATGGCCAGTT CGCCGCATCG TTAAGCCGCG ATTCAGTTGC CCTATGGACA
ATAGCCGACG GCAAATCCAG TGGATGGTGG TCACTCCCCG CCTCGGGTGA GAGTGTCGCC
GTGGCCAATA ATGGCGCCCT GCTCATAGGC CTAAACGATG GCAGCGTGAT GTCGCTCAAT
GCGGCCAAAA CCGCACTGAT TAAATTTTTA GGACATAAAG AGCGAGTCAA TACGGTCGCA
CTTTCCGCCG ATGGTCGCAT TGCCCTCACG GGCTCCAATG ATATGCAGGC TATCCTGTGG
CAGGCGCAAA CGGGGCAGCC TATCCACACT TGGGATATAG GTAGTCGAGT GACTAAGGTC
GCGCTCAACG ACAGTGGCAC ATTAAGCTTT ACCAATGGCA GTCTCAATGA GGCGAAAGTG
TGGGACAACA ATAGCGGTAA AGTGTTAAAT CAATTAGAGA TATACCGTCG GCAAATGACC
TTTTCTGCGG TGCGCTTTAC CAAGCAAGAC AGCCAGCTGC TCACTGGCAC GCCCGCGCGC
GAAGTCATAC TCTGGCAACG TCAAACGGGT AAACCAATTG CTAAGTGGCA AATTGCGCTG
ACTAAAAACA CCCAAAACCG AGGAGCCGTT GTATACTCTG TGGCAATTCG CGATACCAAT
AAAGTGGTTA GTATCAGTAG CCAAGGCTTA GTAGAGACTT GGCAGGAGTA G
 
Protein sequence
MKKTLLLVFC TIFLAACQPK ADDIRVLSQE PSYSASLSSD GNIAIVATQS QGVQCWDLTT 
HSLKYQWVHG DLNTGVTATA ISPNGQFAAS LSRDSVALWT IADGKSSGWW SLPASGESVA
VANNGALLIG LNDGSVMSLN AAKTALIKFL GHKERVNTVA LSADGRIALT GSNDMQAILW
QAQTGQPIHT WDIGSRVTKV ALNDSGTLSF TNGSLNEAKV WDNNSGKVLN QLEIYRRQMT
FSAVRFTKQD SQLLTGTPAR EVILWQRQTG KPIAKWQIAL TKNTQNRGAV VYSVAIRDTN
KVVSISSQGL VETWQE