Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_0939 |
Symbol | |
ID | 4256241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | - |
Start bp | 1075082 |
End bp | 1076032 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638121550 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_736995 |
Protein GI | 114046445 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000121304 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0978141 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAAA CCCTACTGCT GGTATTTTGC ACAATTTTTT TAGCGGCATG TCAGCCAAAA GCCGATGATA TTCGTGTACT TTCACAGGAA CCGTCATACA GCGCGAGCCT CTCTAGCGAC GGCAATATCG CCATTGTCGC CACCCAAAGC CAAGGGGTGC AATGTTGGGA CTTAACCACC CACAGCCTCA AATACCAATG GGTTCATGGG GATCTCAATA CTGGCGTCAC CGCAACCGCC ATTTCCCCTA ATGGCCAGTT CGCCGCATCG TTAAGCCGCG ATTCAGTTGC CCTATGGACA ATAGCCGACG GCAAATCCAG TGGATGGTGG TCACTCCCCG CCTCGGGTGA GAGTGTCGCC GTGGCCAATA ATGGCGCCCT GCTCATAGGC CTAAACGATG GCAGCGTGAT GTCGCTCAAT GCGGCCAAAA CCGCACTGAT TAAATTTTTA GGACATAAAG AGCGAGTCAA TACGGTCGCA CTTTCCGCCG ATGGTCGCAT TGCCCTCACG GGCTCCAATG ATATGCAGGC TATCCTGTGG CAGGCGCAAA CGGGGCAGCC TATCCACACT TGGGATATAG GTAGTCGAGT GACTAAGGTC GCGCTCAACG ACAGTGGCAC ATTAAGCTTT ACCAATGGCA GTCTCAATGA GGCGAAAGTG TGGGACAACA ATAGCGGTAA AGTGTTAAAT CAATTAGAGA TATACCGTCG GCAAATGACC TTTTCTGCGG TGCGCTTTAC CAAGCAAGAC AGCCAGCTGC TCACTGGCAC GCCCGCGCGC GAAGTCATAC TCTGGCAACG TCAAACGGGT AAACCAATTG CTAAGTGGCA AATTGCGCTG ACTAAAAACA CCCAAAACCG AGGAGCCGTT GTATACTCTG TGGCAATTCG CGATACCAAT AAAGTGGTTA GTATCAGTAG CCAAGGCTTA GTAGAGACTT GGCAGGAGTA G
|
Protein sequence | MKKTLLLVFC TIFLAACQPK ADDIRVLSQE PSYSASLSSD GNIAIVATQS QGVQCWDLTT HSLKYQWVHG DLNTGVTATA ISPNGQFAAS LSRDSVALWT IADGKSSGWW SLPASGESVA VANNGALLIG LNDGSVMSLN AAKTALIKFL GHKERVNTVA LSADGRIALT GSNDMQAILW QAQTGQPIHT WDIGSRVTKV ALNDSGTLSF TNGSLNEAKV WDNNSGKVLN QLEIYRRQMT FSAVRFTKQD SQLLTGTPAR EVILWQRQTG KPIAKWQIAL TKNTQNRGAV VYSVAIRDTN KVVSISSQGL VETWQE
|
| |